Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1791 |
Symbol | |
ID | 3908872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2051651 |
End bp | 2051863 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637883685 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_485410 |
Protein GI | 86748914 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.29852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATGG GAACCGTGAA GTGGTTCAAC GCGACCAAGG GCTACGGCTT CATCCAGCCG GATGATGGCG GCAACGACGT GTTCGTTCAC ATCAGCGCCG TCGAGCGCGC GGGCCTCGGC ACGCTGCGTG AAGGCCAGAA GATCAGCTAC GAAATCGTCG CCGATCGCCG CTCTGGCAAG TCGTCTGCCG ATAATCTGCG CGCTGCCAGC TAA
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Protein sequence | MSMGTVKWFN ATKGYGFIQP DDGGNDVFVH ISAVERAGLG TLREGQKISY EIVADRRSGK SSADNLRAAS
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