| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1789 |
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| Symbol | |
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| ID | 3908870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2050298 |
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| End bp | 2050843 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637883683 |
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| Product | TadE-like |
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| Protein accession | YP_485408 |
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| Protein GI | 86748912 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.513248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTCGT TGTTGCTTTC GCGCGCTGTG CTCTTGGCGC GGCGGTTCAG TCGCAATCGC
CGCGGGTCGG CTGCGATCGA ATTCGCGATG ATCGCGCCGA TCTTCATCGC ATTGCTGTTC
GCGATCATCG AGACCGCCTT CGTGTTTCTC GCCAGTCAGG TGCTCGAGAC CGCGGTGCAG
GATTCGGCGC GGTTGATCCT CACCGGACAG GCGCAGGCGG CGTCCTATAC GCAATCCCAG
TTCAAGACCG ATCTGTGCAA CCGGCTCAAG GCGCTGTTCA GCTGCGACGG CGTCTATGTC
GACGTGCAGA GCTACGGCAG CGATTTCTCG ACGGTGAGCA TCACCACGCC GATCGACTCC
AGCAAGAATT TCGTCAACAC CATGAAATAC AGCCCCGGCG CCGCCGGCGA CATCGTGGTG
GTGCGGGCGT TCTATCAATG GCCGCTGTTC GTCACCGGGC TCGGCTGGAA CATCGCTAAT
CTCGCCGACA GCAAGCGGCT GTTGAGCGCG ACCGCGGCGT TCCGCAACGA GCCTTACAGC
AACTAG
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| Protein sequence | MMSLLLSRAV LLARRFSRNR RGSAAIEFAM IAPIFIALLF AIIETAFVFL ASQVLETAVQ
DSARLILTGQ AQAASYTQSQ FKTDLCNRLK ALFSCDGVYV DVQSYGSDFS TVSITTPIDS
SKNFVNTMKY SPGAAGDIVV VRAFYQWPLF VTGLGWNIAN LADSKRLLSA TAAFRNEPYS
N
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