| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1735 |
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| Symbol | |
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| ID | 3909722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1981409 |
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| End bp | 1982758 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883629 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_485354 |
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| Protein GI | 86748858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0819299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCCGA TCATCACGAA AACGCCGCGG ATAGCGGCCT GCGTGATCGC ATTGCTGGGG
CTGGGGCTGC ACGCCACCAG CAGCGTGGCG GAACCGGCCG GCGCGCCGGC CGCGGATCCA
CCCCGGGCGC TGGCCGATTG GGGTGTCCAG TTCAGCGCCA CCTACATCGG CGAAACGCTG
GCCGACGTGT CCGGTGGCAT GAGACGCGGG ACGATCTATG CGGGTCGTCT CGATCTCGGC
ACCACCGTCG ATCTCGACCG GCTGTTCGGC TGGCACGGCG CGACCTTTCA CGCCAACCTG
TTTCAGATCC ACGGCAACAA TTTGTCGCGC AACTATGTCG GCAATCTGCT GCTGGTGAGC
GGCATCGAAT CGCTGCCGGC GACCCGGCTC TACGAGGCCT GGATCGAACA ATCGATGCTC
GGCGGCGCGC TGTCCATCAA GGTCGGGCAG CAATCCGCCG ACACCGAATT CGTCGACAGC
CGCTATCTCG ACATGTTCGT CAACGCCGCC CTGGGCTGGC CCGGTCTCAC CGGCGTCGTG
CTGCCGAGCG GAGGGCCGTC GCCGCCACTG GCGGTGCCGG GTGTCCGCAT CAAGGCGCGG
TTCGGCGACA AGCTCACCGC CTCGGTCGCG GTGTTCGACG GCGATGCCGC GCCGCCCGGT
CCCGGCGATC CGCAGAGCAG GAATCCGAAC GGGTTGCTGT TTCGCGTGCA CGACCCGGCC
TGGCTGATCG GACAAGTGAA ATACGGTTTC GGCAATGGCA ACGGAATGCC TTCCGGCATC
ACCGCCGGTG CCTGGTATCA TTTCGGCACG TTCGACAGCC AGCGCTTCAC CGCGCAGGGC
TCCTCGGTCG CAGATCCCGC GGGCTCCGGG CTGCCGGCCA GGCTGCGCGG CGATCAGGGC
GTGTTCGCAG TCTACGAGCA GCCGCTGTCC CACAGCGCCG CCGATCCGGC CAAAGGCACC
GGCTTGGTCG CGCGCGTGCT GGCGAGCCCG TCGGACCGCA ACCTGATCAG CTTCTATGTC
GATGCGGCAT TGCTGTTCAC CGGCTTCAGC CCGTCGCGCC CGGACGACAA GTTCGGCGTG
GCGATCAGTT ACGCCCGGAT CTCGGATGCG GCACGCGCGC TCGATCGCGA CGTGCGGCGC
TGGAGCGGCA TCGCGTCGCC GGTCCGCGAC TTCGAGGCCG TGATCGAGCT GACCTATCTG
GCGCAAATCA CCGGCAATTT CGCTGTCCAG CCGGTGATCG AATACGTGAT GCATCCAGCC
GGCGGCGCGA CCGATCCGTT CGATCCCGCC GGGACCAGGC GGATCAGGGA CGCGGTGGTG
CTCGGCATCC GCACCACGCT GAGCTACTGA
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| Protein sequence | MLPIITKTPR IAACVIALLG LGLHATSSVA EPAGAPAADP PRALADWGVQ FSATYIGETL
ADVSGGMRRG TIYAGRLDLG TTVDLDRLFG WHGATFHANL FQIHGNNLSR NYVGNLLLVS
GIESLPATRL YEAWIEQSML GGALSIKVGQ QSADTEFVDS RYLDMFVNAA LGWPGLTGVV
LPSGGPSPPL AVPGVRIKAR FGDKLTASVA VFDGDAAPPG PGDPQSRNPN GLLFRVHDPA
WLIGQVKYGF GNGNGMPSGI TAGAWYHFGT FDSQRFTAQG SSVADPAGSG LPARLRGDQG
VFAVYEQPLS HSAADPAKGT GLVARVLASP SDRNLISFYV DAALLFTGFS PSRPDDKFGV
AISYARISDA ARALDRDVRR WSGIASPVRD FEAVIELTYL AQITGNFAVQ PVIEYVMHPA
GGATDPFDPA GTRRIRDAVV LGIRTTLSY
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