Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1728 |
Symbol | |
ID | 3908253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1970537 |
End bp | 1971703 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637883622 |
Product | radical SAM family protein |
Protein accession | YP_485347 |
Protein GI | 86748851 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.791785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0366359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATAC CGTTTCACAA AGAGCTGGTG ATCGGCGGCT ATCTGCTCAA GCAGAAGCTG CTGGGCCGCA AGCGCTACCC GCTGGTGCTG ATGCTCGAGC CGCTGTTCCG CTGCAACCTC GCCTGCGTCG GCTGCGGTAA GATCGACTAT CCCGACGCGA TCCTGGATCG CCGCATGAGC GCACAGGAGT GCTGGGACGC GGCCGAGGAA TGCGGCGCAC CGATGGTGGC GATCCCGGGC GGCGAGCCGC TGATCCATCG CGAGATCGGT GAGATCGTGC GTGGCCTGGT GGCGCGCAAG AAGTTCGTGT CGCTGTGCAC CAACGCATTG CTGCTCGAAA AGAAGCTGCA TCTGTTCGAG CCGTCGCCCT ATCTGTTTTT CTCGGTGCAT CTCGACGGCC TCAAGGAGCA CCACGACAAG GCGGTGTCGC AGCCGGGCAC GTTCGACCGC GCGCTGAAGG CGATCAAGGC GGCCAAGGCC AAGGGCTTCA CCGTCAACGT CAATGCCACG ATCTTCGACA ACCATCCGGC CGAAGAGATC GCCAAGTTCC TCGACCTCAC CGCGGAGCTG GGCGTCGGCG TCTCGATGTC ACCGGGCTAC GCCTATGAGC GGGCGCCGGA TCAGGAGCAC TTCCTGAACC GCACCAACAC CAAGAACCTG TTCCGCAAGG TGTTCGAACT CGGCAAGGGC AAGAAGTGGA ACTTCATGCA TTCCGGCCTG TTCCTGGACT TCCTGGCCGG CAACCAGTCG TTCGAATGCA CGCCGTGGGG AATGCCCGCG CGCAACATCT TCGGCTGGCA GAAGCCCTGC TATCTGCTCG GCGAAGGTTA TACCAAGACC TTCAAGGAGC TGATGGAGAC CACCGACTGG GATTCCTACG GCACCGGCAA ATACGAGAAG TGCGCCGACT GCATGGCGCA TTGCGGCTAT GAGCCGACCG CGGCGACGGC GTCGCTGAAC AATCCGCTGA AGGCGGCCTG GGTCGCGCTG CGCGGCATCC GGACCTCGGG GCCGATGGCG CCCGAGATCG ATCTGTCGAA CCAACGTCCG GCTCAGTACA TCTTCACCGA GCAGGTTCAG AAGACGCTGT CAGAGATCCG CCGCGACGAG GCCGCTGCTG CTGCCGCCAA ACGTCAGCCG CAACCGCAGG CCTCCACCGC GGCCTAA
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Protein sequence | MAIPFHKELV IGGYLLKQKL LGRKRYPLVL MLEPLFRCNL ACVGCGKIDY PDAILDRRMS AQECWDAAEE CGAPMVAIPG GEPLIHREIG EIVRGLVARK KFVSLCTNAL LLEKKLHLFE PSPYLFFSVH LDGLKEHHDK AVSQPGTFDR ALKAIKAAKA KGFTVNVNAT IFDNHPAEEI AKFLDLTAEL GVGVSMSPGY AYERAPDQEH FLNRTNTKNL FRKVFELGKG KKWNFMHSGL FLDFLAGNQS FECTPWGMPA RNIFGWQKPC YLLGEGYTKT FKELMETTDW DSYGTGKYEK CADCMAHCGY EPTAATASLN NPLKAAWVAL RGIRTSGPMA PEIDLSNQRP AQYIFTEQVQ KTLSEIRRDE AAAAAAKRQP QPQASTAA
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