| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1728 |
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| Symbol | |
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| ID | 3908253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1970537 |
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| End bp | 1971703 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637883622 |
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| Product | radical SAM family protein |
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| Protein accession | YP_485347 |
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| Protein GI | 86748851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.791785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0366359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATAC CGTTTCACAA AGAGCTGGTG ATCGGCGGCT ATCTGCTCAA GCAGAAGCTG
CTGGGCCGCA AGCGCTACCC GCTGGTGCTG ATGCTCGAGC CGCTGTTCCG CTGCAACCTC
GCCTGCGTCG GCTGCGGTAA GATCGACTAT CCCGACGCGA TCCTGGATCG CCGCATGAGC
GCACAGGAGT GCTGGGACGC GGCCGAGGAA TGCGGCGCAC CGATGGTGGC GATCCCGGGC
GGCGAGCCGC TGATCCATCG CGAGATCGGT GAGATCGTGC GTGGCCTGGT GGCGCGCAAG
AAGTTCGTGT CGCTGTGCAC CAACGCATTG CTGCTCGAAA AGAAGCTGCA TCTGTTCGAG
CCGTCGCCCT ATCTGTTTTT CTCGGTGCAT CTCGACGGCC TCAAGGAGCA CCACGACAAG
GCGGTGTCGC AGCCGGGCAC GTTCGACCGC GCGCTGAAGG CGATCAAGGC GGCCAAGGCC
AAGGGCTTCA CCGTCAACGT CAATGCCACG ATCTTCGACA ACCATCCGGC CGAAGAGATC
GCCAAGTTCC TCGACCTCAC CGCGGAGCTG GGCGTCGGCG TCTCGATGTC ACCGGGCTAC
GCCTATGAGC GGGCGCCGGA TCAGGAGCAC TTCCTGAACC GCACCAACAC CAAGAACCTG
TTCCGCAAGG TGTTCGAACT CGGCAAGGGC AAGAAGTGGA ACTTCATGCA TTCCGGCCTG
TTCCTGGACT TCCTGGCCGG CAACCAGTCG TTCGAATGCA CGCCGTGGGG AATGCCCGCG
CGCAACATCT TCGGCTGGCA GAAGCCCTGC TATCTGCTCG GCGAAGGTTA TACCAAGACC
TTCAAGGAGC TGATGGAGAC CACCGACTGG GATTCCTACG GCACCGGCAA ATACGAGAAG
TGCGCCGACT GCATGGCGCA TTGCGGCTAT GAGCCGACCG CGGCGACGGC GTCGCTGAAC
AATCCGCTGA AGGCGGCCTG GGTCGCGCTG CGCGGCATCC GGACCTCGGG GCCGATGGCG
CCCGAGATCG ATCTGTCGAA CCAACGTCCG GCTCAGTACA TCTTCACCGA GCAGGTTCAG
AAGACGCTGT CAGAGATCCG CCGCGACGAG GCCGCTGCTG CTGCCGCCAA ACGTCAGCCG
CAACCGCAGG CCTCCACCGC GGCCTAA
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| Protein sequence | MAIPFHKELV IGGYLLKQKL LGRKRYPLVL MLEPLFRCNL ACVGCGKIDY PDAILDRRMS
AQECWDAAEE CGAPMVAIPG GEPLIHREIG EIVRGLVARK KFVSLCTNAL LLEKKLHLFE
PSPYLFFSVH LDGLKEHHDK AVSQPGTFDR ALKAIKAAKA KGFTVNVNAT IFDNHPAEEI
AKFLDLTAEL GVGVSMSPGY AYERAPDQEH FLNRTNTKNL FRKVFELGKG KKWNFMHSGL
FLDFLAGNQS FECTPWGMPA RNIFGWQKPC YLLGEGYTKT FKELMETTDW DSYGTGKYEK
CADCMAHCGY EPTAATASLN NPLKAAWVAL RGIRTSGPMA PEIDLSNQRP AQYIFTEQVQ
KTLSEIRRDE AAAAAAKRQP QPQASTAA
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