Gene RPB_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1718 
Symbol 
ID3908243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1958061 
End bp1959644 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content61% 
IMG OID637883612 
Productradical SAM family protein 
Protein accessionYP_485337 
Protein GI86748841 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.545031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.172284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCTG AATCCGGCCA GAGCAGCCGT CGCATTCTGT GCGTTTTTCC GCGCTACACG 
AAGTCCTTCG GCACCTTCCA GAACTCCTAT CCGCTGATGG ACGGGGTCGC GGCCTTCATG
CCGCCGCAGG GCCTGCTCGT GATCGCCGCC TATCTGCCGG AAGACTGGTC GGTGCGTTTC
ATCGACGAGA ATATCCGGCC TGCCACCGAT GACGATTTCG ATTGGGCCGA TGCGGTATTC
GTCAGCGGCA TGCACATCCA GCGGCAGCAG ATGATCGACA TCTGCCGGCG CGCGCACGCT
TACGATCTGC CGGCCGCGAT CGGCGGTCCG TCGGTCAGCG CCTGCCCGGA CCACTACCCG
AGCTTCGACT ATCTGCACGT CGGCGAACTC GGCGATGCCA CCGATCAGCT GATCGCCCGG
CTTGCGCACG ACGTGGCGCG GCCAGATCGA CAGATCGTCT TCACCACCGA AGATCGCCTC
GACATGACGC TGTTTCCGAT TCCGGCCTAC GAGCTGGCGG AATGCAGCAA ATACATGCTG
GGGAGCATCC AGTATTCCAG CGGCTGCCCG TACCAGTGCG AGTTCTGCGA TATCCCCGCG
CTCTACGGCC GCAATCCGCG GCTGAAGACC CCGGAGCAGA TCATCATCGA ACTCGACCGC
ATGGTCGAAT GCGGCATTCG CGGCTCGGTG TATTTCGTCG ACGACAATTT CATCGGCAAC
CGCAAGGCCG CGCTCGATCT GCTGCCGCAT CTCGTCGAGT GGCAGAAGCG TACCGGCTTC
GCGCTGCAAC TCGCCTGCGA GGCGACGCTG AACATCGCCA AGCGTCCGGA AATCCTGACG
CTGATGCGGG ACGCATACTT CACCACGATC TTCTGCGGCA TCGAGACGCC GGATCCGACG
GCGCTGAAAG CGATGCAAAA GGACCACAAC ATGATGGTCC CGATTCTCGA GGGGGTGCAG
ACGATCTCGA GTTACGGTAT CGAAGTGGTG TCCGGCATCA TCCTCGGCCT CGACACCGAT
ACGCCGGAGA CCGGTGAATT CCTGATGCAG TTCATCGAGC AGTCGCAGAT TCCGCTGCTG
ACGATCAATC TCCTGCAGGC GCTGCCGAAG ACCCCGCTGT GGGATCGACT GGAGCGTGAA
GGTCGGTTGA TTCACGACGA CGGCCGCGAA TCCAATGTCG ACTTCCTGTT GCCGCACGAT
CAAGTGGTGG CGATGTGGAA GGACTGCATG GCGCGCGCCT ATGAGCCTGA AGCGCTGCTG
AGCCGCTACG AATATCAGGT CCGCCACGCT TACGCGACGC GACTCCATCC GAATACGCCG
CAGCGGGCTT CGAAAGCCAA CGTCAAGCGC GGCCTGATCA TGCTGCGCAA CATCATCTGG
CGTATCGGCA TTCGCGGCGA CTATAGGTTG GCGTTCTGGA AGTTTGCGCT GCCCCGGCTG
ATTCGCGGCG ACATCGAGAA TCTGCTTCTG GTGATGGTGG TCGCACACCA TCTGATCGTC
TATGCACGCG AGGCGTCGCG CGGTCAGGCC AATGCGTCGA ACTATTCGAT CCGGCTGCGT
GAGGCCTCGG TGCCTGCGGA ATAG
 
Protein sequence
MRAESGQSSR RILCVFPRYT KSFGTFQNSY PLMDGVAAFM PPQGLLVIAA YLPEDWSVRF 
IDENIRPATD DDFDWADAVF VSGMHIQRQQ MIDICRRAHA YDLPAAIGGP SVSACPDHYP
SFDYLHVGEL GDATDQLIAR LAHDVARPDR QIVFTTEDRL DMTLFPIPAY ELAECSKYML
GSIQYSSGCP YQCEFCDIPA LYGRNPRLKT PEQIIIELDR MVECGIRGSV YFVDDNFIGN
RKAALDLLPH LVEWQKRTGF ALQLACEATL NIAKRPEILT LMRDAYFTTI FCGIETPDPT
ALKAMQKDHN MMVPILEGVQ TISSYGIEVV SGIILGLDTD TPETGEFLMQ FIEQSQIPLL
TINLLQALPK TPLWDRLERE GRLIHDDGRE SNVDFLLPHD QVVAMWKDCM ARAYEPEALL
SRYEYQVRHA YATRLHPNTP QRASKANVKR GLIMLRNIIW RIGIRGDYRL AFWKFALPRL
IRGDIENLLL VMVVAHHLIV YAREASRGQA NASNYSIRLR EASVPAE