Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1718 |
Symbol | |
ID | 3908243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1958061 |
End bp | 1959644 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637883612 |
Product | radical SAM family protein |
Protein accession | YP_485337 |
Protein GI | 86748841 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.545031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.172284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCTG AATCCGGCCA GAGCAGCCGT CGCATTCTGT GCGTTTTTCC GCGCTACACG AAGTCCTTCG GCACCTTCCA GAACTCCTAT CCGCTGATGG ACGGGGTCGC GGCCTTCATG CCGCCGCAGG GCCTGCTCGT GATCGCCGCC TATCTGCCGG AAGACTGGTC GGTGCGTTTC ATCGACGAGA ATATCCGGCC TGCCACCGAT GACGATTTCG ATTGGGCCGA TGCGGTATTC GTCAGCGGCA TGCACATCCA GCGGCAGCAG ATGATCGACA TCTGCCGGCG CGCGCACGCT TACGATCTGC CGGCCGCGAT CGGCGGTCCG TCGGTCAGCG CCTGCCCGGA CCACTACCCG AGCTTCGACT ATCTGCACGT CGGCGAACTC GGCGATGCCA CCGATCAGCT GATCGCCCGG CTTGCGCACG ACGTGGCGCG GCCAGATCGA CAGATCGTCT TCACCACCGA AGATCGCCTC GACATGACGC TGTTTCCGAT TCCGGCCTAC GAGCTGGCGG AATGCAGCAA ATACATGCTG GGGAGCATCC AGTATTCCAG CGGCTGCCCG TACCAGTGCG AGTTCTGCGA TATCCCCGCG CTCTACGGCC GCAATCCGCG GCTGAAGACC CCGGAGCAGA TCATCATCGA ACTCGACCGC ATGGTCGAAT GCGGCATTCG CGGCTCGGTG TATTTCGTCG ACGACAATTT CATCGGCAAC CGCAAGGCCG CGCTCGATCT GCTGCCGCAT CTCGTCGAGT GGCAGAAGCG TACCGGCTTC GCGCTGCAAC TCGCCTGCGA GGCGACGCTG AACATCGCCA AGCGTCCGGA AATCCTGACG CTGATGCGGG ACGCATACTT CACCACGATC TTCTGCGGCA TCGAGACGCC GGATCCGACG GCGCTGAAAG CGATGCAAAA GGACCACAAC ATGATGGTCC CGATTCTCGA GGGGGTGCAG ACGATCTCGA GTTACGGTAT CGAAGTGGTG TCCGGCATCA TCCTCGGCCT CGACACCGAT ACGCCGGAGA CCGGTGAATT CCTGATGCAG TTCATCGAGC AGTCGCAGAT TCCGCTGCTG ACGATCAATC TCCTGCAGGC GCTGCCGAAG ACCCCGCTGT GGGATCGACT GGAGCGTGAA GGTCGGTTGA TTCACGACGA CGGCCGCGAA TCCAATGTCG ACTTCCTGTT GCCGCACGAT CAAGTGGTGG CGATGTGGAA GGACTGCATG GCGCGCGCCT ATGAGCCTGA AGCGCTGCTG AGCCGCTACG AATATCAGGT CCGCCACGCT TACGCGACGC GACTCCATCC GAATACGCCG CAGCGGGCTT CGAAAGCCAA CGTCAAGCGC GGCCTGATCA TGCTGCGCAA CATCATCTGG CGTATCGGCA TTCGCGGCGA CTATAGGTTG GCGTTCTGGA AGTTTGCGCT GCCCCGGCTG ATTCGCGGCG ACATCGAGAA TCTGCTTCTG GTGATGGTGG TCGCACACCA TCTGATCGTC TATGCACGCG AGGCGTCGCG CGGTCAGGCC AATGCGTCGA ACTATTCGAT CCGGCTGCGT GAGGCCTCGG TGCCTGCGGA ATAG
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Protein sequence | MRAESGQSSR RILCVFPRYT KSFGTFQNSY PLMDGVAAFM PPQGLLVIAA YLPEDWSVRF IDENIRPATD DDFDWADAVF VSGMHIQRQQ MIDICRRAHA YDLPAAIGGP SVSACPDHYP SFDYLHVGEL GDATDQLIAR LAHDVARPDR QIVFTTEDRL DMTLFPIPAY ELAECSKYML GSIQYSSGCP YQCEFCDIPA LYGRNPRLKT PEQIIIELDR MVECGIRGSV YFVDDNFIGN RKAALDLLPH LVEWQKRTGF ALQLACEATL NIAKRPEILT LMRDAYFTTI FCGIETPDPT ALKAMQKDHN MMVPILEGVQ TISSYGIEVV SGIILGLDTD TPETGEFLMQ FIEQSQIPLL TINLLQALPK TPLWDRLERE GRLIHDDGRE SNVDFLLPHD QVVAMWKDCM ARAYEPEALL SRYEYQVRHA YATRLHPNTP QRASKANVKR GLIMLRNIIW RIGIRGDYRL AFWKFALPRL IRGDIENLLL VMVVAHHLIV YAREASRGQA NASNYSIRLR EASVPAE
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