| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1688 |
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| Symbol | |
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| ID | 3908675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1922830 |
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| End bp | 1924077 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883582 |
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| Product | Acyl-CoA dehydrogenase-like |
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| Protein accession | YP_485307 |
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| Protein GI | 86748811 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.78575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.535517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG ACGACACCCC GCAGGAAGCC GAATTCCGCG CCAAGGCGCG TGCCTGGATC
GACGCCAACG CGCCGAAGCA ATATGAAGAG GAACTGCGCA AGGCCTCGCT CGGCCGCGTT
CAGCTCAAGG GCGCCAACAT TCTCGAGGTC GCCAAGGCTT GGCAGAAGAA GAAGGCCGAC
GCCGGCTGGG CCGTGCCGCA TTGGCCGAAG GATTACGGCG GCCGCGGCGC GACGCCGATC
GAGCGGGTGA TCTGGCAGCA GGAAGAGGGC GTCTACGGCA AGCTCGGCGC GCTGTTCATC
ATCGGCCAGG GCATGTGCGG GCCGACCATG ATGGCGTTCG CCTCGGAGGA CCAGAAGCGA
TACTATTTGC CGCCGCTGGC GTCGGGCGAG AACATCTGGT GTCAGTTGTT CTCGGAGCCC
GCCGGCGGTT CGGACGTCGC CGGCCTGCGC ACGCGCGCGG AGAAGGACGG CGACGACTGG
ATCATCAACG GCCAGAAGAT CTGGACCTCC GGCGCGCATT ATTCGGACTA CGGCATCCTG
ATCACCCGCA CCGACCCGAC CGTGCCCAAG CACAAGGGCC TGACGATGTT CTTCCTCGAC
ATGAGGAGCA AGGGCGTCGA GATCAAGCCG ATCAAGCAGG CCAACGGCAA TTCCGACTTC
AATGAAGTGT ACTTCACCGA CGTGCGGATT CCGGACAGTC AGCGGTTGGG CGCCGTCGGC
GACGGCTGGA ACGTGTCGCT GACGACGCTG ATGAACGAGC GGATGTCGAT CGGCGCCAAT
GTGGCGACTG GGTTTCCGGA GTTGTTCGAG TACTGCAATT CGCTGATGCT CGACGGCGGC
CCCGCGATCG AGGACCGAGC GGTGCGCAGT AAGCTCGCCA ACTGGGCGGT GCGCGCCAGC
GGGTTGAAAT ACACCAGCTT CCGCGCGATC TCGGCGCTGT CGAAGGGCGA ACGCCCGGGG
CCGGAGAATT CGATCGGCAA GCTCGTCGCG GGTTCGATGA TTCAGGACGT CGCAATGTAT
GCGCTCGACC TGCAGGGCGC CGGCGGCGTG CTGAGCGGCC CCGAGGATGC GGAAGCCGCC
GGCAAGTTCC AGGCGATGCT GCTGCGTTCG CCGGCGACGC GTGTGGAAGG CGGCACCGAC
GAGATCCTGC GCAACATCAT CGCCGAGCGC GTGCTCGGTC TGCCCGGCGA CATCCGCGTC
GACAAGGACG TGCCGTTCAA CCAGATCCCG ACGCGGGGGC GGGCCTAA
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| Protein sequence | MNFDDTPQEA EFRAKARAWI DANAPKQYEE ELRKASLGRV QLKGANILEV AKAWQKKKAD
AGWAVPHWPK DYGGRGATPI ERVIWQQEEG VYGKLGALFI IGQGMCGPTM MAFASEDQKR
YYLPPLASGE NIWCQLFSEP AGGSDVAGLR TRAEKDGDDW IINGQKIWTS GAHYSDYGIL
ITRTDPTVPK HKGLTMFFLD MRSKGVEIKP IKQANGNSDF NEVYFTDVRI PDSQRLGAVG
DGWNVSLTTL MNERMSIGAN VATGFPELFE YCNSLMLDGG PAIEDRAVRS KLANWAVRAS
GLKYTSFRAI SALSKGERPG PENSIGKLVA GSMIQDVAMY ALDLQGAGGV LSGPEDAEAA
GKFQAMLLRS PATRVEGGTD EILRNIIAER VLGLPGDIRV DKDVPFNQIP TRGRA
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