| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1676 |
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| Symbol | |
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| ID | 3908663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1907753 |
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| End bp | 1908988 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883570 |
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| Product | major facilitator transporter |
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| Protein accession | YP_485295 |
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| Protein GI | 86748799 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAG CCCAGCTCAG CTCGTTTCAG CGCTGGTCGA TTCTGATCGG CGCGTCCGTG
CTGCTCAGCC TCGCAATGGG CATGCGGCAG AGCTTCGGGC TGTTTCAGCC GTCCGTGATT
CGCGATATCG GCATCACCAG CGCCGACTTC TCGCTGGCGA CGGCCCTGCA GAACATCATC
TGGGGCGTGA CGCAGCCGAT GGTCGGGCTG CTCGCCGACC GCTACGGCAC CCGCTGGGTG
ATGCTCGGCG GCGTCGTGGT CTATGCCGCC GGTCTGGTGC TGATGATGGT TGCCGAATCG
GCGCTGGTGT TCACGCTCGG CGCCGGCGTC TGCGTCGGCA TCGCGCTGTC CTGCACCGCC
TCCAGCATGA CCATGACCGT CACGTCGCGC ACGGTGTCGG CGGCCAAGCG CAGCGTCGCG
ATGGGCGCGG TGTCGGCGGC CGGATCGCTC GGCCTGGTGA TCGCCTCGCC GCTGGCGCAG
ACGCTGATCA CCACCGCGGG CTGGCAGATG GCGCTGATCG GCTTTCTCGG CCTCGTCGCG
GTGATGCTGC CGTCGGCGCT GTTCGCCGGC CGCGCCGACA AGATCGAGAT CGAGAAGGCC
GACGATCTGC AGCAGTCGGC CGGCGAAGTG GTGCAGAGCG CCCTCGGCCA TTCCGGCTTC
ATGGTGATGG CGATCGCGTT CTTCGTCTGC GGGCTGCAGC TCGTCTTCAT CACCACGCAT
CTGCCGAACT ATCTGGCGAT CTGCGGCCTC GATCCGTCGC TCGGCGCCAG CGCGCTGGCG
GTGATCGGAT TGTTCAACGT GATCGGCTCC TACGCCTTCG GCTGGCTCGG CGGGCGCTAT
CCCAAACAAT ATCTGCTCGG CGGCATCTAC ATCGTGCGCT CGCTGGCGAT CGCGGCGTAT
TTCTACTTCC CGGCGTCGGC GACCACCACG CTGGTGTTCG CCGCGGTGAT GGGCACGCTG
TGGCTCGGGG TGATTCCGCT GGTCAACGGC CTGGTCGCGC AACTGTTCGG GCTGCGCTAC
ATGGCGACGC TGACCGGCAT CGCCTTCCTC AGCCATCAGG TCGGCTCGTT CATCGGCGCC
TGGGGCGGCG GCGTGATCTA CGATCATCTC GGCAATTATG ATCGCGCCTG GCAGGCGGCG
GTTCTGATCG GGCTGATCGC AGGCACCGCG CAGATGCTGA TGAACGTTCG CCCGCCGCAG
CGGCGGGAGG GCCTCGCGGT GCCGGCCACG GCGTGA
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| Protein sequence | MKAAQLSSFQ RWSILIGASV LLSLAMGMRQ SFGLFQPSVI RDIGITSADF SLATALQNII
WGVTQPMVGL LADRYGTRWV MLGGVVVYAA GLVLMMVAES ALVFTLGAGV CVGIALSCTA
SSMTMTVTSR TVSAAKRSVA MGAVSAAGSL GLVIASPLAQ TLITTAGWQM ALIGFLGLVA
VMLPSALFAG RADKIEIEKA DDLQQSAGEV VQSALGHSGF MVMAIAFFVC GLQLVFITTH
LPNYLAICGL DPSLGASALA VIGLFNVIGS YAFGWLGGRY PKQYLLGGIY IVRSLAIAAY
FYFPASATTT LVFAAVMGTL WLGVIPLVNG LVAQLFGLRY MATLTGIAFL SHQVGSFIGA
WGGGVIYDHL GNYDRAWQAA VLIGLIAGTA QMLMNVRPPQ RREGLAVPAT A
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