| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1654 |
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| Symbol | |
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| ID | 3909931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1883709 |
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| End bp | 1884734 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883548 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_485273 |
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| Protein GI | 86748777 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCCG TCTACAGCGA ACTGCATCGA AGCCACGACC CGCAATTCTT TCTGGTTCGC
GGGATCGTCC AGCGCACTAC CGAACAACCC GAACGTGCCG ACCGGCTGCT GGCGGGACTG
AAGGCCGGCG GTCATTCGCT CGTCGAGCCG ACGGCGTTCG GACAGGGCCC GCGCGCCAGG
GTGCATAGTC CGGAGTATCT CGGCTTTCTC GCCGAGGCCT GGGACGCCTG GGCGGCGCTG
GGCAATTCCG GCCCCGAGAT GATCGCCAAC ATCCATCCCG TCCGCAACGA GGCGACGTAT
CCGACGCACA TCGTCGGCCG CCTCGGCTGG CACACGATCG ATACGTCCTG CCCGATCGGA
CCCGGCACCT GGGCCGCGGT CTGCGCCGCG ACCGATGTCG CGACCTCGGC AGCCCAACTC
GTGATGGACG GGGAAGACGC CGCCTACGCG CTGTGTCGTC CGCCGGGGCA CCACGCCTAT
CGCGATCTCG CCAGCGGCTT CTGCTTTCTC AACAACAGCG CGATCGCGGC CGCCCATCTG
CGGCTGAAGC ACGAGCGCGT CGCGATCCTC GACGTCGACG TTCATCATGG CAACGGCACG
CAGGGCATCT TCTACGAGCG GCCCGACGTG CTCACCGTTT CGATTCACGC CGACCCGACC
TTCTTCAACC CCTTTGTCTG GGGCTACGCG CACGAACGCG GCGCGGGTCC GGGGCTCGGC
GCCAATCTGA ACATCCCGCT GGCGAAGGGC ACCGACGATG ACGGCTATAT CGAGGCGCTC
GGTGTCGCGG AAAAGACGAT TCGCGCTTTT GCGCCCGGCG CTCTGGTCGT CGCGCTCGGC
CTCGATGCAT CCGAGCATGA CCCGCTTGCG GGGCTGGCCG TCACGACCGA TGGATTCCAT
CGCATCGGTG GCGCCATCGC GCGGTTGGGG CTGCCCACCG TGTTCGTTCA GGAAGGCGGA
TATCTGTCGG AGATTCTCGG ACCCAACCTG ACGTCGGCGC TCGCCGGCTT CGAGCAGGTT
CGCTAG
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| Protein sequence | MKAVYSELHR SHDPQFFLVR GIVQRTTEQP ERADRLLAGL KAGGHSLVEP TAFGQGPRAR
VHSPEYLGFL AEAWDAWAAL GNSGPEMIAN IHPVRNEATY PTHIVGRLGW HTIDTSCPIG
PGTWAAVCAA TDVATSAAQL VMDGEDAAYA LCRPPGHHAY RDLASGFCFL NNSAIAAAHL
RLKHERVAIL DVDVHHGNGT QGIFYERPDV LTVSIHADPT FFNPFVWGYA HERGAGPGLG
ANLNIPLAKG TDDDGYIEAL GVAEKTIRAF APGALVVALG LDASEHDPLA GLAVTTDGFH
RIGGAIARLG LPTVFVQEGG YLSEILGPNL TSALAGFEQV R
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