Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1653 |
Symbol | |
ID | 3909930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1882944 |
End bp | 1883660 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883547 |
Product | GntR family transcriptional regulator |
Protein accession | YP_485272 |
Protein GI | 86748776 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACAA TGTCCCCTCC GGTCGGATTG CCCGCTCTCG CTGCGACGGA CCTCGTCGGC CAGGTCGCGC GTGCGCTGAC GCTCGCCATT CTGCAGGGGC GGCTGCCGCC CGGCTCCAAA GTTGTCGAGG CCGGGATCGC CCGGGAGCTG GGTGTCAGCA GGGCGCCGGT GCGCGAAGCC GCGCGGCTGC TGGAAAGTCA GGGCCTGCTG GTGGCGAGCC CGCGTCGCGG CTTCTTCGTG CGGCAATTTG CGGCCGATGA CATCGACGAC ATCTTCGATC TGCGCCTGTG CGTGGAGCGG CACGCCGGCG TGCTCGCCGC GCGCAAACTC ACCCCTGCGA CACGCGATGC GTTGCGGCGG CAGATCGACG TCCTTCACCA GACCGCAAAT CTCGACGACC CGGCCCGGCA GGTCGAAGAG GACTACCGGT TTCATCGGCT GATCTGCGAG ATCGCCGGCA ACCGACGGCT GTTGCGCCTG TTCGACGATC TGGCGTCCGA ACTACGCATG GTCATCGGTC TGATCGGCCG ACTGTACGAC GACCCGCACG AAATCGCGCG GACGCACGAA CCGGTTCTCG CTGCGATCGA GCAAGGCCAC CCCGAAAGGA TCGTGGCGCA TATCGATTAT CACATCGGTC ATGCCTGGCG CGAGGTCGCG AAACTGGTGC GGGAGATTCC TCCCGCGACT GCCGGCGGCA AAATACGATC CGTGTGA
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Protein sequence | MRTMSPPVGL PALAATDLVG QVARALTLAI LQGRLPPGSK VVEAGIAREL GVSRAPVREA ARLLESQGLL VASPRRGFFV RQFAADDIDD IFDLRLCVER HAGVLAARKL TPATRDALRR QIDVLHQTAN LDDPARQVEE DYRFHRLICE IAGNRRLLRL FDDLASELRM VIGLIGRLYD DPHEIARTHE PVLAAIEQGH PERIVAHIDY HIGHAWREVA KLVREIPPAT AGGKIRSV
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