Gene RPB_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1652 
Symbol 
ID3909929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1882051 
End bp1882824 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID637883546 
Productclass II aldolase/adducin-like 
Protein accessionYP_485271 
Protein GI86748775 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.48855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC ACGTACCGCC GGCGGCCATA CTCGATCAGA CCCGCCAGGC CCGGATCGAT 
CTCGCGGCTG CCTACCGGCT GATCCACCGG CTCGGGCTCG ACGACAGCAT CTACACCCAC
ATCTCGGTCA GGCTGCCCGG CCGGCACGAC CGTTTCCTGA TCAACCCCTA CGGGATGCGG
TTCGAAGAGG TGACGGCGTC GAACCTGGTG GAAGTCGATA TCGACGGCAA CATCGTCGAC
GATCCGCTCG GCCTCGGCAT CAATCCCGCC GGCTTCACCA TTCACAGCGC GGTTCACGCC
GCGCGGACGG ATGCGATGTG CGTGCTGCAC ACCCACACCG TCGCCGGCGT CGCGGTGTCC
TGCCAACGCC AGGGGCTGCT GCCTCTCAAC CAATGGGCGC TGCAGTTCAC CGATCGCCTC
GCCTATCACG ACTACGAGGG GATCGCGCTC GATCTCGACG AGCGCGCGCG TCTCGTCGCC
GATCTCGGCG ACAAGTTCGT CATGGTTCTG CGCAATCACG GCATGCTGAC TTGCGGACGA
TCCGTCGCCG AGGCTTTCAA GCTGATGCAC AATCTGGAGC GGTCCTGCCG CGCCCAGCTC
GCGGTGCAGG CGTCCGGCGC CGAGATCAGC CCGCTGTCCG CCGCCGTCGC CCGCAAGACC
GCGGGCCAAT ACGCGAATTT CTACGACAGC ATCGAACTCA GGGGACAGCC CGACAGCGAA
TGGGCCGCCT TCAAGCGGAT GCTGGGCCGC ACCGATCCCG ACTTCATCAA CTAG
 
Protein sequence
MTAHVPPAAI LDQTRQARID LAAAYRLIHR LGLDDSIYTH ISVRLPGRHD RFLINPYGMR 
FEEVTASNLV EVDIDGNIVD DPLGLGINPA GFTIHSAVHA ARTDAMCVLH THTVAGVAVS
CQRQGLLPLN QWALQFTDRL AYHDYEGIAL DLDERARLVA DLGDKFVMVL RNHGMLTCGR
SVAEAFKLMH NLERSCRAQL AVQASGAEIS PLSAAVARKT AGQYANFYDS IELRGQPDSE
WAAFKRMLGR TDPDFIN