| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1565 |
|---|
| Symbol | |
|---|
| ID | 3908764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1763766 |
|---|
| End bp | 1764644 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637883461 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_485186 |
|---|
| Protein GI | 86748690 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.995779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG TTTCCAAGGG CATCATTCTC GCAGGCGGCA GTGGGACGCG GCTGTATCCG
ATGACGGTGT CGGCCTCTAA GCAGCTGCTG CCGATCTACG ACAAGCCGCT GATCTACTAC
CCGCTGTCGA CGCTGATGAT GGCGGGCATC CGCGACATCC TGGTGATCTC GACCCCGGCG
GACCTGCCGC GATTCCAGCA ATTGCTCGGC GACGGCGCGC GCTGGGGGAT GTCGTTCAGC
TACGCCGAGC AGCCGCGCCC CGAAGGGCTG GCGCAGGCCT ACATCATCGG CGCCGATTTC
GTCGCCGGCG GGCCCTCCGC GCTCGTGCTC GGCGACAATC TGTTTTACGG CCACGATCTG
ATTCCGCTGC TGCGGAAGGC GGCGGGCCAG TGCGACGGCG CCACCGTGTT CGCCTATCAG
GTGCGCGATC CGCAGGCCTA CGGCGTCGTC GAATTCGACG ACAACCAGAC CGCGCTCTCG
ATCGAGGAGA AGCCGGCGAC CCCGCGATCC AACTGGGCGG TGACCGGCGT GTACTTCTAC
GATTCACAGG CCGTCGAAAT CGCCGCCGGG CTGAAACCGT CGGCGCGCGG CGAACTCGAG
ATCACCGATC TCAACCGGGC CTATCTCGAA CGCGGTCAAC TCCGCGTCGA AAAGATGGGG
CGCGGTTTCG CTTGGCTCGA TACTGGGACG CCGGACAGTC TGCTGGAGGC GGCCGAGTTC
GTGCGCATCC TGGAAAAGCG GCAGGGCCTC AAGATCTGCT GCCCCGAAGA GATCGCCTTC
CATATGAAGT GGATCGACGC CGATCAGCTC GAAGCTTTGG CGAAGCCGAT CGCGAACAGC
GGCTATGGCC GCTATTTGCT CGCTATCGCG CAACGCTGA
|
|---|
| Protein sequence | MTTVSKGIIL AGGSGTRLYP MTVSASKQLL PIYDKPLIYY PLSTLMMAGI RDILVISTPA
DLPRFQQLLG DGARWGMSFS YAEQPRPEGL AQAYIIGADF VAGGPSALVL GDNLFYGHDL
IPLLRKAAGQ CDGATVFAYQ VRDPQAYGVV EFDDNQTALS IEEKPATPRS NWAVTGVYFY
DSQAVEIAAG LKPSARGELE ITDLNRAYLE RGQLRVEKMG RGFAWLDTGT PDSLLEAAEF
VRILEKRQGL KICCPEEIAF HMKWIDADQL EALAKPIANS GYGRYLLAIA QR
|
|---|
| |