Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1558 |
Symbol | |
ID | 3908757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1756465 |
End bp | 1757358 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637883454 |
Product | inner-membrane translocator |
Protein accession | YP_485179 |
Protein GI | 86748683 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACAC AGCTTCTGTT CCAGCTTCTC GTCAACGGCC TCGTCGTCGG CACGCTGTAC GGCGTGGTGG CGATGAGTTT CGTGCTGATC TACAAGGCCA CGCAGGTCGT CAACTTCGCG CAGGGCGAAT TGCTGCTGAT CGGCGCCTGG GTGTGCTGGG CGCTGCTCGC CAAGTATCAG GTGCCGTTCT ATGTCGGCAT GCCGCTGACG CTGGTGTTCA TGTTCGCGTT CGGCATCGCG ATCCAGATCA TCGTGTTGCG GCCGATGATC GGCGAACCAA TCATCTCGGT GATCATGGTG ACGATCGCGC TGTCGACGGT GTTCCAGGCG ACGCTGAAAT GGATCTTCGG CGTCAACCCG CAGCCGTTCC CGCAGATCTT CACCACCCAG TCGGTGTCGT TCGCAGGCTT CCAGCTGCAG ACCGTCTATG TGATGAGTCT GGTGGTCTCG GTGGCGATGA TGATCGGCAT GGCGTGGTTC TTCAAAGTGT CGAAATACGG ACTGGCGATG CGCGCCACCG CGTTCAACCA GCAGGTCGCG CAGTCGCTCG GCATCTCGGT GAAGAGCGTG TTCGCGATGG CCTGGGCGAT CTCCGCCACC GTCTCGGCGG TCGCCGGCGT CGTCGTCGCG GTGGTCAACG GCGTGTCGTC GGGGCTGTCG GCCTACGGCA TCAAGGTGTT TCCGGCGGCG ATCCTCGGCG GTCTCGACTC GATCGGCGGC GCCGTGCTCG GCGGCATCAT CATCGGCCTC TTGGAAAACC TCGCCCAATA CATCGACAGC GAATATCTGC ACTGGGGCAA TCTCTACGAG ATCGCGCCGT TCTACGTGCT GATCATCATC CTGATGATCA AGCCCTACGG CCTGTTCGGC ACCAAGGACA TCGAGCGCAT CTGA
|
Protein sequence | MNTQLLFQLL VNGLVVGTLY GVVAMSFVLI YKATQVVNFA QGELLLIGAW VCWALLAKYQ VPFYVGMPLT LVFMFAFGIA IQIIVLRPMI GEPIISVIMV TIALSTVFQA TLKWIFGVNP QPFPQIFTTQ SVSFAGFQLQ TVYVMSLVVS VAMMIGMAWF FKVSKYGLAM RATAFNQQVA QSLGISVKSV FAMAWAISAT VSAVAGVVVA VVNGVSSGLS AYGIKVFPAA ILGGLDSIGG AVLGGIIIGL LENLAQYIDS EYLHWGNLYE IAPFYVLIII LMIKPYGLFG TKDIERI
|
| |