Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1548 |
Symbol | |
ID | 3908747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1744455 |
End bp | 1746398 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637883444 |
Product | asparagine synthase, glutamine-hydrolyzing |
Protein accession | YP_485169 |
Protein GI | 86748673 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.545574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGTG TCGCCGGCGT CGCGAGTGCC CGGGGAGTCC GGGTCGAGTT CGAGATCCTG AAGCGGATGA CCGATGCGCT CGCGCATCGC GGCCCGGATG GAGAGGGGCA CTGGCTGTCC GAGGACGGCG AGGTCGCGCT CGGGCACCGA CGGCTGTCGA TCATCGATCT GTCCTCGCAC GGCGCTCAGC CCATGGTGTC GGCGTCCGGC AGATTCGCGA TGTCCTACAA CGGCGAAGTC TACAACTACC TGGAGCTGCG CGACGAGCTG CTGCGCGCCG GCTATCCGTT CCACGGCCAG TCGGACACCG AAGTCATCGT CGCGGGTTTC GACCATTGGG GAATCGAAAA CACCATATCG AGGCTGGCGG GCATGTTCGT GATCGCGGTC TGGGACCGGC GCGACAAGAC CTTGTCGCTG GTCCGCGACC GCATCGGCAT CAAGCCGCTG TACTACTCAG TGATCGACGG TGCGCTGGCT TTCGCATCCG AACTGCGGCC GATCGTTGTT TGGCGAGGCA GCCTTCCGGA GATCTCCCGT CGCGGCCTCT CGGAATTCCT GCGGCTCGGA TACGTTCCCT CGCCACTGAG CATTTTCGAG GGGGTTTTCA AGCTTCCGCC GGCGACGATC GCCACCTTCA GCGGTGGGCA TCTGTCCGAA CCGAAGCCTT ACTGGTCGGT CGATGCAACG GTTGCACGCG GTTTCGCCAA TCTGAGGATG GACGAGACCG AGGTTCTCGA TCAGCTTGAT ACCCGGTTGG GGGATATCGT CGCCCAGCAT ATGGTTTCCG ATGTTCCGCT GGGCGCCTTC CTGTCCGGTG GCATCGATTC CAGCGTCGTG ACCGCGCTGA TGCAGGCCAG AAGCTCGTCG GCCGTCAAGA CGTTCTCGAT CGGTTTCGAC AGTGCCGCTT ACAATGAGGC CGGCTACGCC GCCGAGGTTG CGGCGCATCT CGGCACAGAT CACACCGAAC TCTACATCAC CGAAGCGGAT GCGCTGGCGG TGGTGCCGTC GCTTCCCGAC ATCTACGATG AGCCTTTCGC AGACATCTCG CAAATTCCGA CCTTCCTCGT CGCCGAGCTG GCGCGCCAAA AGGTCACTGT GAGCCTCTCG GGCGACGGCG GCGACGAATT GTTCGGCGGC TACAATCGCT ACATGTTCGT TTCGAACTAC TGGAGCCGGC TCAGCAAGAT TCCGCTCCCG CTGCGACGCG TGGCGGCGTC GGCCATCGCC GCGCCGTCGT CGGCCGGCTG GGACAGGATA TTCGACCTGC TTGGACCGAT GTTGCCTGGG AATGCGCGCC CCGCATTGCC TGGACAAAAG ATGCAGAAGA TCGGTTCGGT GCTGTCGGCG GCCTCCCTGT CCGAGTTGCA GGGGCGGCTG ATCGCCCAAT GGCCCCATCC AGAAGCCGTC ATGGCGCAGG GCTTTGGTGC AGGCTCGGCG CTGATGCTGC CCCCGGCGTC GCAAGTTCCC GATCTTCCCG CCGCGGCGCA GCAGATGGCA TGGGATACCA GCAGCTATCT GGTCGATGAT ATTCTGACGA AGGTCGATCG TGCCACCATG CGGGTGGGTC TCGAGGCTCG CGTCCCGCTA TTGGATCACC GCCTGGTCGA GTTCGCCTGG GAGATTCCGC TGGACATGAA GTTCCGAGAC GGGTCCGGCA AGCACATCCT GAAGCGGTTG CTCGGTCGCT ACGTTCCGCG CGCGATGTTC GACCGTCCCA AGATGGGGTT TGGCGTTCCG GTGGACGACT GGCTCAGGGG GCCTCTCAGG GAATGGGCGG CGAGCTATCT TGCCGCGGCT CGTCACGGCG ATGACTATCT CGACCGCGGC GTCATCGCGG CGACGTGGAA AGAGCATCTG AACGGCAAGA TCAACCGCGG CGGACAGCTT TGGACAATCC TGATGTTTGA TATCTGGCAC CAGAGAATTC GCCAATGGGT GTGA
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Protein sequence | MCGVAGVASA RGVRVEFEIL KRMTDALAHR GPDGEGHWLS EDGEVALGHR RLSIIDLSSH GAQPMVSASG RFAMSYNGEV YNYLELRDEL LRAGYPFHGQ SDTEVIVAGF DHWGIENTIS RLAGMFVIAV WDRRDKTLSL VRDRIGIKPL YYSVIDGALA FASELRPIVV WRGSLPEISR RGLSEFLRLG YVPSPLSIFE GVFKLPPATI ATFSGGHLSE PKPYWSVDAT VARGFANLRM DETEVLDQLD TRLGDIVAQH MVSDVPLGAF LSGGIDSSVV TALMQARSSS AVKTFSIGFD SAAYNEAGYA AEVAAHLGTD HTELYITEAD ALAVVPSLPD IYDEPFADIS QIPTFLVAEL ARQKVTVSLS GDGGDELFGG YNRYMFVSNY WSRLSKIPLP LRRVAASAIA APSSAGWDRI FDLLGPMLPG NARPALPGQK MQKIGSVLSA ASLSELQGRL IAQWPHPEAV MAQGFGAGSA LMLPPASQVP DLPAAAQQMA WDTSSYLVDD ILTKVDRATM RVGLEARVPL LDHRLVEFAW EIPLDMKFRD GSGKHILKRL LGRYVPRAMF DRPKMGFGVP VDDWLRGPLR EWAASYLAAA RHGDDYLDRG VIAATWKEHL NGKINRGGQL WTILMFDIWH QRIRQWV
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