Gene RPB_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1535 
Symbol 
ID3908449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1728992 
End bp1730149 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content61% 
IMG OID637883431 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_485156 
Protein GI86748660 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase
[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GGAAAATCTG CGTGGTCGTC GGGTCGCGTG CCAATTACAG TTCCATCAAA 
TCGGCGATGC GTGCGATCCA GGATCATCCT GCGCTCGAAC TGCAATTGAT CGTCGCCGCC
TCCGCGGTCC TCGATCGATA CGGATCGGTG GTGAACCTGA TCGAGAAGGA CGGCTTCCGG
CCGCACGCGC GGGTCACCAT GCTGATCGAG GGCGAGACCC CCGCGACCAT GGCGAAATCG
ACCGGGCTCG GGCTCATCGA ACTTCCGACT TTGTTCGAGC AACTCGGGCC GGACGTCGTG
CTCACCGTGG GCGATCGTTT CGAAACGATG GCCACGACGT TGGCTGCCGC CTACATGAAT
ATTCCCGTCG CTCACACCAT GGGCGGTGAA GTCAGCGGTA CCATCGACGA GAGCATCAGG
CACGCCGTCA CCAAGTTCGC TCATATCCAT TTCCCGGCGA GCCAGGGCGC GGCCGAACGC
ATCATCAAGC TCGGCGAACT GCCTCGGCAC GTCCATATGG TCGGCTGTCC GCGCATCGAC
CTGGTTGCGG AAATCCTCGG GCGTTCGAGC GGCGGACTCG ATGCCGGTCT GTTTGATCTG
GGGGTCGGCC AGCAGTTTTC GGTCGATGAG CCCTTCGCTC TGGTTTCCCA GCATCCCGTG
ACCACCGAAT ACGGAACCGG CGAGGCGCAG ATCACGCTGA CGCTCGAGGC GGTTCGCGAA
CAGGGCCTCG CGGCCATCGT GCTGTGGCCG AATGCCGACG CGGGGTCCGA CGATATCTCC
CGTGGTATTC GGAAGTGGCG CGAGCGCAAG CTGGACGACC GAATGCACTT CTTCAAGAAT
TTGCCGATCG AGACCTACGT CAATCTGATG CGTTCCGCGG CGTGCCTGGT CGGCAATTCG
AGCAGCGGCA TCAGGGAGGG CGCCTATATC GGCACTCCGG TCGTCAATAT CGGCACCCGG
CAGCACATGC GTGACCGCGG CGACAACGTG ATCGACGTCG GCTACGACAA GAAACAGATT
TCCGATGCGA TCGCCAGGCA AGTCGAGCAC GGCCGCTACG CGATGGATCC GATTTACGGA
GACGGAACCG CGGGCACGAA GATCGCCGAC ATACTCGTCA CGGAGAGGGT GGACGTCCAA
AAGTGTATCA CCTATTGA
 
Protein sequence
MTKRKICVVV GSRANYSSIK SAMRAIQDHP ALELQLIVAA SAVLDRYGSV VNLIEKDGFR 
PHARVTMLIE GETPATMAKS TGLGLIELPT LFEQLGPDVV LTVGDRFETM ATTLAAAYMN
IPVAHTMGGE VSGTIDESIR HAVTKFAHIH FPASQGAAER IIKLGELPRH VHMVGCPRID
LVAEILGRSS GGLDAGLFDL GVGQQFSVDE PFALVSQHPV TTEYGTGEAQ ITLTLEAVRE
QGLAAIVLWP NADAGSDDIS RGIRKWRERK LDDRMHFFKN LPIETYVNLM RSAACLVGNS
SSGIREGAYI GTPVVNIGTR QHMRDRGDNV IDVGYDKKQI SDAIARQVEH GRYAMDPIYG
DGTAGTKIAD ILVTERVDVQ KCITY