| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1524 |
|---|
| Symbol | |
|---|
| ID | 3908438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1716461 |
|---|
| End bp | 1717873 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637883420 |
|---|
| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| Protein accession | YP_485145 |
|---|
| Protein GI | 86748649 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA AGATCACCCC CCTTATCATG TGTGGCGGGG CCGGAACACG ATTGTGGCCG
GCTTCCCGCG AGGTCCGCCC CAAGCAATTC CTACCGTTGT TCGGACCACG TTCGACCTTT
CAGGATACCC TGCTCAGGGT AGCCGATTCG ACCTTGTTCG GACGACCGAT TGTGATCACC
AGCGTGGCCT ATCGGTTCAT GGTTCGCGAG CAGCTCGCGG AGCTCGGCCT CGACGCCGAT
GTCCTGCTCG AACCTTCGCG GCGGGATTCC GGCCCGGCAA TCGCCGCGGG CGCCGTGTTC
GCGCAGCAGC AAGACACCGA CGCGGTCGTC CTGGCGCTCG CCGCAGATCA CGTCGTTCGC
GACAACCCGG CATTCGTCGA GGCTTGCCGC AAGGGTCTTT CGGCGGCCAA TTCCGGGCGG
ATTGTCACTT TCGGCGTGAA CCCCGATCGT GCCGCGACGG AATACGGCTA TATCAGCGCA
GGCGACGCGA TCGCCGACGA TGTCCGCGCC GTGGAGAGAT TCGTCGAAAA GCCGGACGCC
GCGACGGCGG CCGACTATTT CCGGCTCGGC TATCTCTGGA ACAGCGGAAA CTTCATGTTT
CGCGCGGACA TCCTGCTCGA CGAGTATCGC AACCTCGACG CCGAAAGCGT GCAGACGATT
TCCGACGCAG TATCCTTGGC GGGACAGGAT CTCGGCTTCG TCACGCTCGA ACCGGATGCG
TTCGGCAAGG CCAAATCGAT CTCGATCGAC TACGCCGTGA TGGAGAAGAC CAAGCTCGCT
GCGGTCGTCC CGGTGTCGTG CGGCTGGTCC GACGTCGGCT CCTGGCACGC GGTGTGGGAA
CTGTCGCAGA AGGACGAGAG CGGTAACGCC GCGCAAGGCA CGGCCGTGTT CGAGGACTGC
CGCAACTGCA ACGTTTCGAC AGACGGCACG CTGGTGGCGC TCGAAGGCGT CGATGATCTG
GTCGTCGTGG CGACGCAGGA CGCCGTTCTG GTTTCTCGTC AAAAGGACGC GAACGGGCTC
AAGCGGCTGG TCGCGAAGCT CAGGACGGTC GCCCCCGAAG TGACCGATCA CCACCTCAAG
GTCCACCGTC CTTGGGGATC GTACCAGTCG CTCGACAACG GCGATCGTCA CCAGGTCAAA
CGCATCATCG TCAAGGCTGG AGAACGCTTG TCGTTGCAGA AGCACCACCA TCGTTCCGAG
CACTGGATCG TGGTGCGCGG CGCGGCGCTG GTGACGATCA ACGACAGCTT CAAGACTATT
CACGAAAACG AATCGATCTA CATCCCGATC GGCGCAACCC ACCGGCTGGA GAACCCCGGC
AAGATTCCGC TGGAGCTGAT CGAAGTCCAG ACCGGCAGCT ATCTCGGCGA GGACGACATC
GTCAGAATCG AAGACGACTA TCAACGCGCC TGA
|
|---|
| Protein sequence | MTKKITPLIM CGGAGTRLWP ASREVRPKQF LPLFGPRSTF QDTLLRVADS TLFGRPIVIT
SVAYRFMVRE QLAELGLDAD VLLEPSRRDS GPAIAAGAVF AQQQDTDAVV LALAADHVVR
DNPAFVEACR KGLSAANSGR IVTFGVNPDR AATEYGYISA GDAIADDVRA VERFVEKPDA
ATAADYFRLG YLWNSGNFMF RADILLDEYR NLDAESVQTI SDAVSLAGQD LGFVTLEPDA
FGKAKSISID YAVMEKTKLA AVVPVSCGWS DVGSWHAVWE LSQKDESGNA AQGTAVFEDC
RNCNVSTDGT LVALEGVDDL VVVATQDAVL VSRQKDANGL KRLVAKLRTV APEVTDHHLK
VHRPWGSYQS LDNGDRHQVK RIIVKAGERL SLQKHHHRSE HWIVVRGAAL VTINDSFKTI
HENESIYIPI GATHRLENPG KIPLELIEVQ TGSYLGEDDI VRIEDDYQRA
|
|---|
| |