| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1490 |
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| Symbol | |
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| ID | 3908803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1680232 |
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| End bp | 1681515 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883385 |
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| Product | major facilitator transporter |
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| Protein accession | YP_485111 |
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| Protein GI | 86748615 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.189239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.937702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGAC GCCACACAGC TCTCTCAGAC CAGACGGACC ACAAGCCTGT GTCCTCGGCA
ATGTCGCCCT CCGAGCCTCT TCGCGTGACC ACATCCCGGC GACGCCGACG CACTGCGATC
GCGCTTCTCA CTTTTGCCTT CGCGCTGAGC CAGTTCTATC GGACATGTCT CGCGGTCATG
GCGCCCGAGT TGCAGCACGA CCTCGGCCTC TCGCCAGAGG GATTCGGGGC GCTGTCGTCG
TGCTTCTTTC TTTCCTTCGG CCTGGCGCAG ATCCCCGTCG GCGTGCTGTT CGACCGGCTC
GGCGTCGGCC GGCCGACGGC GGCCTTGCTG CTGGTCGGGA CCCTGTCCGC AGTGCTGTTC
ACGTTCGCCT CGTCCGGCCC GCAAGCCATG ATCGCTCAGG TCGGGCTCGG CCTCGCCTGC
GCGCCGGTGT TCATGGGATT GCTGCACTAC GCGGCCGAGA TCCTCGACGA GGCCGACTAT
GCGAAGCTCG TCAGCCGCTC CAACGGCACC GGAATGCTCG GCGCCCTGAT CGCGACCGCG
CCGCTCGGAT GGGCCTCGAT GCAGTTCGGG TGGCGGGTCT CGATGGGCGT TGCCGCTTTG
TGCATGGCGG CCGCCTGCAT CGGCGTGTGG ACCACGGTAA GGGATCAAGG CCATGCCGAA
GCTCGAGGCC GCTCGCTGGG ATCGATGTGC CTGACCAGCC TGCGGCTGCT CGAGATCCGC
GCGCTGTGGA CGTTGCTGCC GATGTGCGTC GCGATGGCGG CCGGCACCGC GTTTCGCAAC
GCCTGGGGCG GTCCATACCT GTCCCACGTC TTTCACATGA ACGCGGAAGT CCGGGGACTC
GGGCTCGCCT TTGTGAGCTT CAGCGCGTTC TGCACCGCGT TCGTGCTTCC GGGCCTGGTC
CGCCGCTTCG ACCTGAAGCC GACGATCGGC GCATGGTCGA CGCTGTCGCT GCTGGCCGGC
GCAGCACTGA CCTTTTTCCC GTCGGCGAAC CCTTATCTCG CGGTCGGGCT GATGGCCGCG
CTCGCCAGCA TCGGCATGCT GCACCCGATC CTGATGGCGC ACGGCCGCAA ACTGTTTCAC
CCGTCGATGC GGGGGCGCGG CCTCGGCGTG ATGAACACGT TCGTGTTCCT GGGCGCCGCG
GTAGCGAGTT GGGCGTTCGG CGCCATCGCG GGCTTCGGCA CGGCCAGCGG CTGGAGCGCG
TCGTCGACCT ATAGCCTCAT CTTCGCGGTG GCTTCGCTGA CGATCGTGGC GGCGCTGATT
CCGTATCGCG TCAGCCCGCG CTGA
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| Protein sequence | MRGRHTALSD QTDHKPVSSA MSPSEPLRVT TSRRRRRTAI ALLTFAFALS QFYRTCLAVM
APELQHDLGL SPEGFGALSS CFFLSFGLAQ IPVGVLFDRL GVGRPTAALL LVGTLSAVLF
TFASSGPQAM IAQVGLGLAC APVFMGLLHY AAEILDEADY AKLVSRSNGT GMLGALIATA
PLGWASMQFG WRVSMGVAAL CMAAACIGVW TTVRDQGHAE ARGRSLGSMC LTSLRLLEIR
ALWTLLPMCV AMAAGTAFRN AWGGPYLSHV FHMNAEVRGL GLAFVSFSAF CTAFVLPGLV
RRFDLKPTIG AWSTLSLLAG AALTFFPSAN PYLAVGLMAA LASIGMLHPI LMAHGRKLFH
PSMRGRGLGV MNTFVFLGAA VASWAFGAIA GFGTASGWSA SSTYSLIFAV ASLTIVAALI
PYRVSPR
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