| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1487 |
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| Symbol | |
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| ID | 3908800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1676719 |
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| End bp | 1677723 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883382 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_485108 |
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| Protein GI | 86748612 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family
[TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.143655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAC TGATTGCTTC ACTCGCCGTC GCCGGTTTGG CGCTGACCGC GGCGCAGGCC
GCCGACAAGC CCGCCAAGAT CACGGTCGGC TATCTCAATC TGGTCAACGC CCAGTTGGTG
ACCAAGAACC TCGGCCTGTT GGCCAAAGAG ATGCCGGGTG TCGAGATCAA ATACGTCAAA
TTCGGCGGCG GCGGCGACAT GCTGCGCGGC ATCGCCGGCA ACGACGTCGA TTTCGGCGGG
CTCGGCAATC CGCCGACCGC GATCGGCATC ACCCGCGGGC TGCCGATCAA GGGCATCCTG
GTGCTCAACA TGCTCGGCGA CGTCGAGTCG ATGGTGGTGC GCACCTCGAA GAACATCAAG
TCGCTGAAGG ATCTGAAGGG CAAGACGGTG GCGGCGCCGT TCGGCTCCAC CACGCACTAC
TTGTTGCTGC AGGCGCTGGC CGACGAGGGC GTCGAGCCGT CGTCGATGAA GATCCTCGAT
CTGCCGCCCT CCGACATCGC AACCGCCTGG ATCCGCGGTG ATCTCGACGC CGCCTGGCTG
TGGGAGCCCA ATCTGGACAA GGCGGTGAAG AACGGCGGCC ACATCTACAT GTCGTCCGGG
CTGATGGAGA AGCGCGGCTA CCCGACCTGG GACATCGGCG TGGTGATGAA CGGATTCGCG
GAGAAGTACC CCGACTATGT CGAGAAATTC GTCAAGGCGG AATGCGCCGG CATCGACTTC
TGGATCAAGA ACCCGGACAA GACCGCGGCG ATCATCGCCG AGGAGCTGTC GCTGCCGCCG
GAAGACGCGA TGCGGATGAT GAACGGCACC GCCATGGTGC CTTGCGACAA GCAGCTGACC
GCAACCTATC TCGGCACCAC GGCCAAGAAA GGCCAGTTCG TCGACACGCT GCTGGCCACC
GGCGACTTTC TGGTGAAGCA GGAGCGGCTC CCGAAACTGC TGCCGCGCAA GGATTTCGAA
GCCTTCCTGG TGCCTGGCTA TATCGAAAAA GTAGTCGGCA AGTAA
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| Protein sequence | MKRLIASLAV AGLALTAAQA ADKPAKITVG YLNLVNAQLV TKNLGLLAKE MPGVEIKYVK
FGGGGDMLRG IAGNDVDFGG LGNPPTAIGI TRGLPIKGIL VLNMLGDVES MVVRTSKNIK
SLKDLKGKTV AAPFGSTTHY LLLQALADEG VEPSSMKILD LPPSDIATAW IRGDLDAAWL
WEPNLDKAVK NGGHIYMSSG LMEKRGYPTW DIGVVMNGFA EKYPDYVEKF VKAECAGIDF
WIKNPDKTAA IIAEELSLPP EDAMRMMNGT AMVPCDKQLT ATYLGTTAKK GQFVDTLLAT
GDFLVKQERL PKLLPRKDFE AFLVPGYIEK VVGK
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