Gene RPB_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1481 
Symbol 
ID3908794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1670447 
End bp1671298 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID637883376 
ProductABC transporter related 
Protein accessionYP_485102 
Protein GI86748606 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA TGATGCAGCT CGCGGACAAT CGCATGAGCC TCGCCGATGC GACGACGCAA 
GCCCCGATCG AGATCGACGT CGACGACGTC AGCATCGTGT TCGACACGCC GAAAGGCCAG
GTGGTGGCCG CCGACCGTGT GTCGTTCCAG ATCCGGCGCG GTGAATTCGT CTGCCTGCTC
GGCCCTTCCG GCTGCGGCAA ATCCACCGTG CTGAACACCA TCGCGGGTTT CGAGACGCCG
TTCGAAGGCA GTGTCCGTGT CGCCCGCAAG CCGGTCACCG GCCCGGGTCC GGACCGCGGC
ATGGTGTTTC AGCAGCCGCA TCTGTTTCCC TGGAAATCGG TGCGCAGCAA CATTTCGCAC
GGCCCCAGCA TGGCCGGCAA ATCGAGCAAG CAGGCCGGCG CGATCGCCGA CGATCTGATC
GCGATGGTCG GGCTCACTCG CTTCGCCGAC GCCTATCCGC ACACCCTGTC GGGCGGCATG
CAGCAGCGGG TGGCGATCGC CCGCGCGCTG GCCAACCGCC CCGCGGTGCT GCTGATGGAC
GAGCCGTTCG GCGCGCTCGA TGCGCAGACC AGGGCGGTGA TGCAGGAAAG CCTGCTGGCG
CTGTGGGCCC AGGTCGGCAC CACCATCGTG TTCGTCACCC ACGACATCGA CGAGGCGATC
TTCCTGGCCG ACCGCGTGCT GTTGATGAGC GCCGGTCCCG GCCGCATCCT GCGCGACCTG
CGCATCGATC TGCCGCGCCC GCGCAGCAGC GAGCTGGTGC TGTCGCCGGC CTATGCAGCC
TACAAGAAAG ACTGCCTCGA TTTGATCCGC GCCGAAAGCC TGCGCGCCTT CGATCAGCAG
GCAGTGAAGT AG
 
Protein sequence
MMTMMQLADN RMSLADATTQ APIEIDVDDV SIVFDTPKGQ VVAADRVSFQ IRRGEFVCLL 
GPSGCGKSTV LNTIAGFETP FEGSVRVARK PVTGPGPDRG MVFQQPHLFP WKSVRSNISH
GPSMAGKSSK QAGAIADDLI AMVGLTRFAD AYPHTLSGGM QQRVAIARAL ANRPAVLLMD
EPFGALDAQT RAVMQESLLA LWAQVGTTIV FVTHDIDEAI FLADRVLLMS AGPGRILRDL
RIDLPRPRSS ELVLSPAYAA YKKDCLDLIR AESLRAFDQQ AVK