Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1416 |
Symbol | |
ID | 3908366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1605482 |
End bp | 1605970 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883310 |
Product | YbaK/prolyl-tRNA synthetase associated region |
Protein accession | YP_485037 |
Protein GI | 86748541 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.318628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCG AATCCGTCCG CGCCTGGTTC GCGCAATACG CCCCCGACAT CACCGTCGAA GAATCAGACA AGAGTTCGGC CACCGTGCCG CTCGCTGCGG CGGCTTATGG CGTCCCGCCG GAGCAGATCG CCAAGACGCT GTCGCTGCGC GTCGGCGACC GCGTCGTGCT GGTGGTGACC AGCGGTACCG CACGGCTCGA CAACAAGAAG GCCAGGGCGG CATTCGGCGC CAAGCCGAAG ATGCTCGGCG TGCACGAGGT CGCCGATCTC ACCGGCCATG AAGTCGGCGG CGTCTGTCCG TTCGGCCTGA AGGATCCGCT GCCGATCTAT TGCGACGTCT CGCTGCAGGC ATTCGACGTC GTGGTGCCGG CGGCGGGTTC GACCCACAGC GCGGTGCGGA TCGCGCCGCG GCGGATGGCG GAACTGGTCG GCGCCGAATG GGTCGACGTC AGCGAAGTTC GCGCCGAACA GGCCGCGCCG CAACCGTAG
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Protein sequence | MSLESVRAWF AQYAPDITVE ESDKSSATVP LAAAAYGVPP EQIAKTLSLR VGDRVVLVVT SGTARLDNKK ARAAFGAKPK MLGVHEVADL TGHEVGGVCP FGLKDPLPIY CDVSLQAFDV VVPAAGSTHS AVRIAPRRMA ELVGAEWVDV SEVRAEQAAP QP
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