| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1413 |
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| Symbol | |
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| ID | 3908363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1603103 |
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| End bp | 1603660 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637883307 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_485034 |
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| Protein GI | 86748538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.026067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCCGGCC CGATGATTTG CAGCCGGATA GTGACCGTGA AACAGATAGC TTCGCCGACC
AATGTCGAAG TCTTTTTCGA CGCGGACGAT ATCATCGTCT CGAAGACCGA TCTCAAAGGC
CGCATCACCT ACGCCAACAA GGTGTTCACC GACATCTGCG GGTACAGCGA AGCCGAGCTG
ATCGGCCAGC CGCACTCGAT CGTGCGCCAT CCGGATATGC CGCGCTGCGT GTTCAAGCTG
CTGTGGGACA CGCTGGCGGA AGGCCGTGAG ATCTTCGCCT ATGTCAAGAA CATGACGCGC
ACCGGCGACT TCTATTGGGT GTTCGCCCAT GTCACGCCGT CGTTCGATTC GGCCAAACGG
GTGATCGGCT ACCACTCCAA TCGCCGCGTG CCGGATCGCC GGGTCGTTTC GGCGCTGGCG
CCGGTCTACG CCGAGTTGAG CGAGGTGGAA AAGCGTCATC GCAACGGCAA GGACGGGCTC
GCCGCCGGCA CGCAGCACCT GATCGATTTC GTCAAAGCCA AGAATGTGCC CTATGATCAA
CTCGTCTTCT CTCTCTAA
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| Protein sequence | MSGPMICSRI VTVKQIASPT NVEVFFDADD IIVSKTDLKG RITYANKVFT DICGYSEAEL
IGQPHSIVRH PDMPRCVFKL LWDTLAEGRE IFAYVKNMTR TGDFYWVFAH VTPSFDSAKR
VIGYHSNRRV PDRRVVSALA PVYAELSEVE KRHRNGKDGL AAGTQHLIDF VKAKNVPYDQ
LVFSL
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