Gene RPB_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1396 
Symbol 
ID3908346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1587138 
End bp1588004 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID637883290 
Productsulfate ABC transporter, permease protein CysW 
Protein accessionYP_485017 
Protein GI86748521 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.390211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC CGCAGCCCCC GATCAAGAGA GACTGGATGG TAACGCCGGT CGGCGCCGGG 
CCGGTCGCAC GCTTCGTCGT GCTGAGCGTG GTCGCCGTGG TGACGCTGTT CATTCTGGTG
GCGCCGCTGG CGGTGATCCT GAGTTCGGCC TTCGCGCAGG GCGTCGGCGT GTTCCTGCGC
AATCTCGGCG ATCCCGGCAC GCTGCACGCG ATGTGGCTGA CCACGATCAC CGCGCTGATC
GCGGTACCGG TGAACATCCT GTTCGGGCTC GCTGCGGCCT GGACCGTGAC CAAGTTCGAA
TTCCCCGGCC GCACACTGCT GATCGCGCTG ATCGAGCTGC CCTATTCGAT CTCGCCGATC
GTCGCCGGCG TCGCCTATCT GTTCGTCTAC GGCTCGCAGG GGCTGTTCGG GCCGCTGCTG
GAACAGCTCG ACATCAAGGT GATGTTCGCG CTGCCGGGCA TCGTGCTCGC CAGCATGTTC
GTCACCGCGC CCTATGTCGC CCGCGAGTTG ATCCCGCTGA TGCAGGTGCA GGGCACCGAC
GAGGAAGAGG CAGCGGTGAC GCTCGGCGCC GGCGGCTTCG CCACCTTCCT GCGCGTCACG
CTGCCGAATA TCCGCTGGGC GGTGCTGTAC GGCGCGATCC TATGCAACGC CCGGGTGCTG
GGCGAATTCG GCGCGGTGTC GGTGGTGTCC GGCAACGTCC GCGGCCAGAC CACGACGCTG
CCGCTGCAGA TCGAACTGCT GTACCAGGAC TATAATGTCG CAGGCGCGTT CGCCGCCGCG
ACCACATTGA CGGCGGTGGC GGTGGTCACC ATCCTGCTGA AAATGCTGCT GGAGCGGCTG
GCCGGCGACG AGCATCCTTC GGCTTAG
 
Protein sequence
MAKPQPPIKR DWMVTPVGAG PVARFVVLSV VAVVTLFILV APLAVILSSA FAQGVGVFLR 
NLGDPGTLHA MWLTTITALI AVPVNILFGL AAAWTVTKFE FPGRTLLIAL IELPYSISPI
VAGVAYLFVY GSQGLFGPLL EQLDIKVMFA LPGIVLASMF VTAPYVAREL IPLMQVQGTD
EEEAAVTLGA GGFATFLRVT LPNIRWAVLY GAILCNARVL GEFGAVSVVS GNVRGQTTTL
PLQIELLYQD YNVAGAFAAA TTLTAVAVVT ILLKMLLERL AGDEHPSA