| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1358 |
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| Symbol | |
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| ID | 3908463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1547329 |
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| End bp | 1548774 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883252 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_484979 |
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| Protein GI | 86748483 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.199626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.187922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGA TCGCGCTCAT TCTGCTGCCG GCCATCGGCG GCTTCGTCGC ATTCTTCATC
GCGGGGCGCG GTGAGCGCGA GCGCTGGGTC ACGATCGCGA CCTTCGCGCT GATGCTGGTG
CTGCTGATGG CGATCGTCGC CGGCGCGCCG GAAGGCCGCT GGTACGCCAA GGTCTCCTAT
CCGTGGGTGC CGTCGTTCGG TATCTCGCTC GATTTCGCGA TGGACGGGTT GTCGGCGGCG
CTGATCGCGA TATCGGCCGG GCTCGGCATC ATCTCGGTGA TGGCGTCGTG GTCGGAGATC
CGCACCCAGT CCGGGCTGTT CCATGCCTGC CTGTGCTGGA CCGTGGCGGC GACGATCGGC
GTCTTCCTCT CGTTCGATCT GCTGATCTTC GCGTTCTTCT GGGAAGCGAT GCTGGTGCCG
GCGTTCACGC TGATCGCGGT CTGGGGCCAT GGCGATCGGG AAGGCGCGGC GCTGAAATTC
CTGATCTTCA ATGCGGTCGC GGGCTTCGGC CTGCTGGCGG CGGCGTTTGC GCTGGCGTCG
ATGGCCGATC ACATGACCTT CAGCGCGTTC GAACTCGCGG AGATGAAGCT CAGTACGTCG
GTGCAGGTCT GGATGCTGCT CGGCTTCTCG CTGGCGTTTC TGGTCAAGCT GTCGGTGCCG
CCGTTCCACG CCTGGCTGCC TGAGGCGCAT ACGCTGGCGC CGACCGCGGG CTCGATCCTG
CTCGCCGGCA TCCTGCTGAA GACCGGCGCC TACGGCCTGT TCCGCTTCGC GCCGATGCTG
TTTCCGCAGG GGCTCGAAGC GGTCGCGCCC TACGGCATTG CGCTCGGCGC TGCTGGCGCG
CTGTATGGCG GCCTGGTCGC CTGCGGCCAG AACGACGCCA AGCGGCTGGT CGCCTATACC
TCGATCGCCC ATATGTCGAT CGTGCTGATG GGCATCGCCG CGGGCGTGCA CTACGCGGTC
GCCGGCGCCG CCGTGGAGAT GATCGCGCAT TCGTTCTCGG CCTCGGCGCT GTTCCTGCTG
ATTGGGGCGC TGTACGAGCG CACCCACACC CGCGATCTGC GCCAGCTCGG TGGCCTGCAG
CAGATCGCGC CGCGCTTCGC TGCGGCCTTC GCGCTGTTCT GCTCGGCGCT GCTGGCGCTG
CCCGGCACGG CGAATTTCGT CGGCGAGGCG CTGGTGGTCG TCGGCATCTT CCAGGTCAAT
TGGGTGTTCG CACTGCTGGC GCTGTCGACG CTGGTGGTCT CGGTGATCTA CGCGACGCGG
CTGTTGAAGG GGCTGGTGTT CGGTCAGCCG CGGCTCGGCG CGCCGGTCGC CGACCTGACC
TGGCGTGAAT ATGGGCCGGT GCTGGCGATG GGCCTCGCCA CGCTGGTAAT CGGCCTGTAT
CCGCAGAGCC TGCTGGCGCT GCTGGAGCCC GCGATCAAGG CCGCTCTGGT GCTGCCGCAG
CCATGA
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| Protein sequence | MALIALILLP AIGGFVAFFI AGRGERERWV TIATFALMLV LLMAIVAGAP EGRWYAKVSY
PWVPSFGISL DFAMDGLSAA LIAISAGLGI ISVMASWSEI RTQSGLFHAC LCWTVAATIG
VFLSFDLLIF AFFWEAMLVP AFTLIAVWGH GDREGAALKF LIFNAVAGFG LLAAAFALAS
MADHMTFSAF ELAEMKLSTS VQVWMLLGFS LAFLVKLSVP PFHAWLPEAH TLAPTAGSIL
LAGILLKTGA YGLFRFAPML FPQGLEAVAP YGIALGAAGA LYGGLVACGQ NDAKRLVAYT
SIAHMSIVLM GIAAGVHYAV AGAAVEMIAH SFSASALFLL IGALYERTHT RDLRQLGGLQ
QIAPRFAAAF ALFCSALLAL PGTANFVGEA LVVVGIFQVN WVFALLALST LVVSVIYATR
LLKGLVFGQP RLGAPVADLT WREYGPVLAM GLATLVIGLY PQSLLALLEP AIKAALVLPQ
P
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