| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1330 |
|---|
| Symbol | |
|---|
| ID | 3907838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1516679 |
|---|
| End bp | 1517971 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883224 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_484951 |
|---|
| Protein GI | 86748455 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.396862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.220841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATG TCGTCGTAGT CGGCGCCCAA TGGGGCGACG AGGGGAAGGG CAAGATCGTC
GATTGGCTGT CGGAGCAGGC CGACATCGTC GCCCGCTTCC AGGGCGGGCA CAATGCCGGC
CACACGCTGG TGATCAACGG CGAGACCTAC AAGCTGGCGC TGCTGCCGTC GGGCGTGCTG
CGGCCGTCGA AGCTGGCGGT GATCGGCAAC GGCGTGGTGT TCGATCCGCA GGCGTTTCTC
GATGAGGTCG AGCGGCTGAC CAAACAGGGC GTCGCGATCT CGCCGGAGAA TCTGCGCGTC
GCCGAGAACG TCACGCTGAT CCTGCCGCTG CATCGCGAAC TCGACGCGCT GCGCGAGAAC
GCCAGCAAGG CGACCGCGAT CGGCACCACC CAGCGCGGCA TCGGCCCGGC CTATGAAGAC
AAGGTCGGCC GCCGCGCGAT CCGGCTGATG GATCTCGCCG ACATCGACAC GCTGCCGCAC
AAGATCGAGC GGCTGCTGAC GCATCACAAT GCGCTGCGCC GCGGTCTGGG CCTCGCCGAA
TTCGAGGCCG GCGCGATCCT GAAGGAGCTG ACCGCGCTGG CGCCGAAGCT CTTGCCCTAT
GCCGAGACGG TGTGGCGGCT GCTCGACATC AAGCGCCGCG AAGGCAAGCG CATCCTGTTC
GAGGGCGCGC AGGGCGCGCT GCTGGATGTG GATCACGGCA CCTATCCCTA CGTCACCTCG
TCGAACACGG TGGCGGCGCA GGCCGCGACC GGCACCGGCA TGGGGCCGGG CTCGGTCGGC
TATGTGCTCG GCATCTGCAA GGCCTACACC ACGCGCGTCG GCCAGGGGCC GTTCCCGACC
GAACTGGACA ACGAGATCGG CCGCAAGATC GGCGAGCGCG GCCGCGAATT CGGCACCAAC
ACCGGGCGGC CGCGCCGCTG CGGCTGGTTC GACGCGGTGC TGGTGCGCCA GACGGTGCGG
ACCTGCGGCA TCCACGGCCT GGCGCTGACC AAGCTCGACA TTCTCGACGG CTTCGAACAG
ATCGAGGTCT GCGTCGGCTA TCGACTCGAC GGCAAGGAGA TCGACCATCT GCCGGCCGGC
GAGGGCGCGC AGGCGCGCGT CGAGCCGATC TACGAGACCA TCGAGGGCTG GAAGGAACCG
ACCGCCAATG CGCGGTCCTG GGCCGAGCTG CCGGCGCAGG CGATCAAATA TGTTCGCCGC
ATCGAGGAGC TGGTCGGCTG TCCGGTGGCG CTGTTGTCCA CCAGTCCGGA GCGCGAGGAT
ACAATTCTGG TGCAGAATCC CTTCGAGGCT TAA
|
|---|
| Protein sequence | MANVVVVGAQ WGDEGKGKIV DWLSEQADIV ARFQGGHNAG HTLVINGETY KLALLPSGVL
RPSKLAVIGN GVVFDPQAFL DEVERLTKQG VAISPENLRV AENVTLILPL HRELDALREN
ASKATAIGTT QRGIGPAYED KVGRRAIRLM DLADIDTLPH KIERLLTHHN ALRRGLGLAE
FEAGAILKEL TALAPKLLPY AETVWRLLDI KRREGKRILF EGAQGALLDV DHGTYPYVTS
SNTVAAQAAT GTGMGPGSVG YVLGICKAYT TRVGQGPFPT ELDNEIGRKI GERGREFGTN
TGRPRRCGWF DAVLVRQTVR TCGIHGLALT KLDILDGFEQ IEVCVGYRLD GKEIDHLPAG
EGAQARVEPI YETIEGWKEP TANARSWAEL PAQAIKYVRR IEELVGCPVA LLSTSPERED
TILVQNPFEA
|
|---|
| |