Gene RPB_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1325 
Symbol 
ID3907833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1511504 
End bp1512424 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content68% 
IMG OID637883219 
Producthypothetical protein 
Protein accessionYP_484946 
Protein GI86748450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0356003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.196429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG CGCCCCGCTC CTTCTCACGC CTCGCCGACC AGCCCTATCT CCTGCTCAGC 
CTGACCTCGC TGTTCTGGGC CGGCAACGCC ATCGTCGGCC GCGCCGCCGC CGGGCATTTT
CCGCCGGTGA CGCTGTCGTT CCTGCGCTGG GCCTGCGCCT TCGCGATCGT GCTGCCGTTC
GCCGCGCGGC ACCTGATCGC CGACTGGGGC GTGATCCGCC GGCATCTCGG GCTGATGATC
GTGCTGTCGA TCGCCGGGAT CTCGATCTTC AACACGCTGC AATACACCGC GCTGCAATAC
ACCACCGCGA TCAACATCCT GCTGCTGCAA TCGACCGCGC CGCTGTTCGT GGCGATCTGG
GCGCTGATCG TGCTCGGCGT CCGGCTGACG CTGACGCAGG CGCTCGGCAT CATGACGTCG
ATGCTCGGCG TGGTGGTGAT CATCCTGCAC GGCGACATCG CCCAACTGGC GGCGATCGAT
CTCAACCGCG GCGACCTGAT GTTCTTCGGC GCGCTGGCGG TGTTCGGGCT GTACACCGCG
CTGACACAGC GGCGGCCGCC GATGCACGCG CTGTCGTTCC TCGCCTTCAG CTTCGGCTGC
GGCGCGCTGT TCCTGATCCC GCTGCTGGTC TGGGAACTGA CGACGCGGCC GGCGCCGGCG
ATCGACCTCG CCAATGTGGC GTCGCTGGCC TATGTGGTGA TCTTCCCGTC GATCCTCGCT
TATCTCTGCT ACAACCGCGG CGTCAGGCTG ATCGGCGCCA ACCGCTCGGC GCCGTTCTTC
CATCTGATCC CGGTGTTCGG CTCGGCGATG GCGATCCTGT TCCTCGGCGA ACGGCCGCAT
CTCTACCACG CCGTCGGCTA CGCGCTGGTG CTGACCGGCG TCATCGTCGC GGCGCGGACG
CCGAAGCCGA CGGCGGCGTG A
 
Protein sequence
MTAAPRSFSR LADQPYLLLS LTSLFWAGNA IVGRAAAGHF PPVTLSFLRW ACAFAIVLPF 
AARHLIADWG VIRRHLGLMI VLSIAGISIF NTLQYTALQY TTAINILLLQ STAPLFVAIW
ALIVLGVRLT LTQALGIMTS MLGVVVIILH GDIAQLAAID LNRGDLMFFG ALAVFGLYTA
LTQRRPPMHA LSFLAFSFGC GALFLIPLLV WELTTRPAPA IDLANVASLA YVVIFPSILA
YLCYNRGVRL IGANRSAPFF HLIPVFGSAM AILFLGERPH LYHAVGYALV LTGVIVAART
PKPTAA