Gene RPB_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1324 
Symbol 
ID3907832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1511060 
End bp1511488 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID637883218 
Producthypothetical protein 
Protein accessionYP_484945 
Protein GI86748449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00524213 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.18086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCG AGCAATTGAA CATCGAGGGT CTGAAGGAGC TGGATCGCGA GGACCGCGGG 
CCGGTGGTGA TGGTCAATCT GATGCGGTTC AACGAGAGCG CGCCGGACGG CAGCGGCTCC
GGCTGGGACG CCTATCTGCG CTACAGCGTC CTGACCGTGC CGATGATCAA GGCGCGCGGC
GGCACGCTGC TGTGGACCGG CAACGCCAAG GCGGTCGCGT TCGGCCGCGA CGACGGCCGG
CATTGGGACT ATCTGGCGCT GGTGTACTAC CCGTCGATCG ATGCGTTCCT CGAGATGATG
TCGTCGCCGG AATATCAGTC ACAATGCGAT CCGCACCGCC GGGCCGCCTG CGCCGATCAT
CTGATCATCT GCACCCGCGA AGCCTACAGC AAGTTCGGCA TCGCCGCGCC GCGGCAGGAA
AATCTGTGA
 
Protein sequence
MGIEQLNIEG LKELDREDRG PVVMVNLMRF NESAPDGSGS GWDAYLRYSV LTVPMIKARG 
GTLLWTGNAK AVAFGRDDGR HWDYLALVYY PSIDAFLEMM SSPEYQSQCD PHRRAACADH
LIICTREAYS KFGIAAPRQE NL