Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1322 |
Symbol | |
ID | 3907830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1508850 |
End bp | 1509755 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883216 |
Product | hypothetical protein |
Protein accession | YP_484943 |
Protein GI | 86748447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00901243 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.345258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCTCCC TGTTCCGCAC GGCCTTCGGC TGGCTCGCCA ACCAGCCTTA TCTGCTGCTC AGCCTGACCT CGCTGTTCTG GGCGGGCAAC ATCGTGCTGG CGCGCGCTGT CGCCGGGCAC GTGCCGCCGG TGACGCTGTC CTGCGTGCGC TGGGTCGGCG CCATGCTGCT GCTGCTGCCG TTCGCCTGGC CGCATCTGCG GCGCGACTGG CGCCGGCTGC GCGCGCATTG GGGGCTGATG TTCGTGCTGT CGGCGACCGG CTTTGCGATC AACAACGCGC TGGCCTATTG GGGCCTGCAG TTCACCCAGG CGCTGAACGC GCTGCTGATG CAATCGTCAG GGCCGCTGTT CGTGGCGCTG TGGTCGCTGC TGCTGTTCGG GGTGCGGCTG ACCTGGATGC AGACGATCGG CATCGCGCTG TCGCTGATCG GCGTGCTCAC CATCATCCTG CGCGGCAACC TGCTGGCTTT GGCCGGAATC GACCTCAACC GCGGCGACCT GATGGTCGCG GGCGCGCTGT GCGCGTTCGG GCTGTATTCG GCAATGATGC CGAAACGACC GGTGACGCAT CCGCTGTCGC TGCTGGTGGT CACCACCGGC GGCGGCGCAT TGTTGCTGCT GCCGTTCGCG GTGGCGGAAT TCGCCGCCGG GGTGCGGCCG AGCGCCGACT GGATCACCGC GTCGTCGCTG GCCTATGTGG TGATCTTTCC GTCGGCATTG GCCTATCTGT GCTTCAACCG CGGCGTCGCG CTGATCGGCC CGAACCGCTC GGCGCCGTTC CTGCACCTGA TGCCGGTGTT CGGCTCGGTG ATGGCGATCG TGCTGCTCGG CGAGAAGCCC GAACTGTTCC ACCTCGCCGG CTACGCCATG GTGGTCGCCG GCGTGTTCAT CGCCGCAAGG CGGTGA
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Protein sequence | MISLFRTAFG WLANQPYLLL SLTSLFWAGN IVLARAVAGH VPPVTLSCVR WVGAMLLLLP FAWPHLRRDW RRLRAHWGLM FVLSATGFAI NNALAYWGLQ FTQALNALLM QSSGPLFVAL WSLLLFGVRL TWMQTIGIAL SLIGVLTIIL RGNLLALAGI DLNRGDLMVA GALCAFGLYS AMMPKRPVTH PLSLLVVTTG GGALLLLPFA VAEFAAGVRP SADWITASSL AYVVIFPSAL AYLCFNRGVA LIGPNRSAPF LHLMPVFGSV MAIVLLGEKP ELFHLAGYAM VVAGVFIAAR R
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