Gene RPB_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1322 
Symbol 
ID3907830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1508850 
End bp1509755 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID637883216 
Producthypothetical protein 
Protein accessionYP_484943 
Protein GI86748447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00901243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.345258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTCCC TGTTCCGCAC GGCCTTCGGC TGGCTCGCCA ACCAGCCTTA TCTGCTGCTC 
AGCCTGACCT CGCTGTTCTG GGCGGGCAAC ATCGTGCTGG CGCGCGCTGT CGCCGGGCAC
GTGCCGCCGG TGACGCTGTC CTGCGTGCGC TGGGTCGGCG CCATGCTGCT GCTGCTGCCG
TTCGCCTGGC CGCATCTGCG GCGCGACTGG CGCCGGCTGC GCGCGCATTG GGGGCTGATG
TTCGTGCTGT CGGCGACCGG CTTTGCGATC AACAACGCGC TGGCCTATTG GGGCCTGCAG
TTCACCCAGG CGCTGAACGC GCTGCTGATG CAATCGTCAG GGCCGCTGTT CGTGGCGCTG
TGGTCGCTGC TGCTGTTCGG GGTGCGGCTG ACCTGGATGC AGACGATCGG CATCGCGCTG
TCGCTGATCG GCGTGCTCAC CATCATCCTG CGCGGCAACC TGCTGGCTTT GGCCGGAATC
GACCTCAACC GCGGCGACCT GATGGTCGCG GGCGCGCTGT GCGCGTTCGG GCTGTATTCG
GCAATGATGC CGAAACGACC GGTGACGCAT CCGCTGTCGC TGCTGGTGGT CACCACCGGC
GGCGGCGCAT TGTTGCTGCT GCCGTTCGCG GTGGCGGAAT TCGCCGCCGG GGTGCGGCCG
AGCGCCGACT GGATCACCGC GTCGTCGCTG GCCTATGTGG TGATCTTTCC GTCGGCATTG
GCCTATCTGT GCTTCAACCG CGGCGTCGCG CTGATCGGCC CGAACCGCTC GGCGCCGTTC
CTGCACCTGA TGCCGGTGTT CGGCTCGGTG ATGGCGATCG TGCTGCTCGG CGAGAAGCCC
GAACTGTTCC ACCTCGCCGG CTACGCCATG GTGGTCGCCG GCGTGTTCAT CGCCGCAAGG
CGGTGA
 
Protein sequence
MISLFRTAFG WLANQPYLLL SLTSLFWAGN IVLARAVAGH VPPVTLSCVR WVGAMLLLLP 
FAWPHLRRDW RRLRAHWGLM FVLSATGFAI NNALAYWGLQ FTQALNALLM QSSGPLFVAL
WSLLLFGVRL TWMQTIGIAL SLIGVLTIIL RGNLLALAGI DLNRGDLMVA GALCAFGLYS
AMMPKRPVTH PLSLLVVTTG GGALLLLPFA VAEFAAGVRP SADWITASSL AYVVIFPSAL
AYLCFNRGVA LIGPNRSAPF LHLMPVFGSV MAIVLLGEKP ELFHLAGYAM VVAGVFIAAR
R