| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1316 |
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| Symbol | |
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| ID | 3907824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1499620 |
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| End bp | 1501305 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883210 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_484937 |
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| Protein GI | 86748441 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.234166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTCA GCAGCCTTCG TATCACCCCC AAGATCGGAA TCCTGGTCGG CGTTGCCTTG
CTCGGCCTGT GCGCCGCCGG GGCCTATGCC GGCATCATGA TGCGTCAGGA ATTGCTGAAC
GCCCGAATCG AACAGGCCAA GTCGATCGCC GAGTCGGCGC GCAGCATGGC GATCGGCCTA
CAGAAGCAGG TCGATGCCGG CGAACTGACC AAGGACGCCG CGCTCGCCGA ATTCACCCGC
CGGGCCAATA GCCTCACCTA CGACAACGGC AATGGTTATT TGTTCGCCTA CACCAATGAC
GGAGTGACCC TGGCGTCGCC GGACAAGAAG GCGCTCGGCA CCAACCGCAT CAACACGCCG
ACCGGCGACC GCTTTCTGGT TCGCGAACTG CGCGACGGCG TGCTGGCCAA GGGCTACGTG
CTGCTCAACT ATGAATTCCG CAAGCCCGGC TCGGAAGAGT TGATCCGCAA GATGTCCTAC
GGCGTCGCAA TTCCCGGCTG GAACGCTTTC GTCGGCACCG GCGCCTATGT GGACGACATC
GATGCCACGG TGAAACCGGT GGTGTGGATG CTCGGAGTCG GCATCCTGGT CATCGGCGCG
ATCTCGTCGC TGATCGCCTG GCTGATCGGT CGCAGCATCA CCAAGCCGCT CGGCGAACTC
GGCGCGCGGA TGAAATCGCT CGCCTCCGGT GAACTCGAGG CGCCGATCCC CGGGATCGCG
CGCGGCGACG AGGTCGGCGA GATGGCGACC ACCGTTCAGG TGTTCAAGGA CAATGCGCTG
CGGATCCGCG GGCTCGAACA GCAGGAGGCC GAGGTCAAGC AGCGCGCCGC TGCCGAACGC
GCCGCGCTGA TGCAGCAGAT CGCCGACGAT TTCGAGCGCA GCGTCAACGG CGTGGTGCGC
AGCGTGGCGG GCGCGACCGC CGAGCTGCAG ACGACGGCGC AGTCGATGAC CTCGACCGCG
TCGGACGCCA GCTCGCGCGC CGCCGCGGTC GGCTCCGCAT CGGATACGGC GTCGAGCATG
GTCGGCACCG TCGCGTCGGC GTCGGAAGAG CTGTCGGCGT CGGTCGCGGA AATTTCCCGC
CAGGTGCATC AGTCGCGCGA AATCGCCAGC AAGGCGGTCG GCGACGCCGA ACGCACCAAC
GAGACCGTCA AGCTGTTGTC GATCGGCGCC GAGAAGATTG GCGAGGTGGT GCAACTGATC
CATTCGATCG CGTCGCAGAC CAACCTCTTG GCGCTCAACG CCACCATCGA GGCGGCCCGC
GCCGGCGAAT CCGGCCGCGG CTTCGCGGTG GTCGCCTCCG AAGTGAAGGC GCTGGCGAGC
CAGACCGCGA AGGCCACCGA GGAAATCTCC TCGCAAGTGT CGGCGATGCA ATCCTCGACC
GCGACCGCGG TGGAGTCGAT TAACCACATC ACCTCGACGA TCGGCGAAAT GAACAACATC
ACCATGGCGA TTTCTTCCGC CGTGGAGCAG CAGGGCTCGG CGACCCGCGA GATCGCCCGC
AACATCCAGT CGGTCGCGGC CGGGTCGAGC GAAATCAGCA GCCACATCGG CGGCGTCAGC
GCCGCGGCGT CGGCGACCGG CGATGCCGCC GCGCAGGTGC TGACGCATGC CCGCGGTCTC
GACGGCCAGT CCGGCGCGTT GCAATCCGCC GTCGACGACT TCCTGCACAA GGTCCGTGCG
GCGTAG
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| Protein sequence | MKFSSLRITP KIGILVGVAL LGLCAAGAYA GIMMRQELLN ARIEQAKSIA ESARSMAIGL
QKQVDAGELT KDAALAEFTR RANSLTYDNG NGYLFAYTND GVTLASPDKK ALGTNRINTP
TGDRFLVREL RDGVLAKGYV LLNYEFRKPG SEELIRKMSY GVAIPGWNAF VGTGAYVDDI
DATVKPVVWM LGVGILVIGA ISSLIAWLIG RSITKPLGEL GARMKSLASG ELEAPIPGIA
RGDEVGEMAT TVQVFKDNAL RIRGLEQQEA EVKQRAAAER AALMQQIADD FERSVNGVVR
SVAGATAELQ TTAQSMTSTA SDASSRAAAV GSASDTASSM VGTVASASEE LSASVAEISR
QVHQSREIAS KAVGDAERTN ETVKLLSIGA EKIGEVVQLI HSIASQTNLL ALNATIEAAR
AGESGRGFAV VASEVKALAS QTAKATEEIS SQVSAMQSST ATAVESINHI TSTIGEMNNI
TMAISSAVEQ QGSATREIAR NIQSVAAGSS EISSHIGGVS AAASATGDAA AQVLTHARGL
DGQSGALQSA VDDFLHKVRA A
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