| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1315 |
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| Symbol | |
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| ID | 3907823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1497847 |
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| End bp | 1499436 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883209 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_484936 |
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| Protein GI | 86748440 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.357791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CCAAAGTCCT CATTTCCGAC GCCCTGTCGG AAGCCGCCGT GCAGATCTTC
AAGGATCGCG GCATCGACGT CGATTTCCAG CCGGCGCTCG GTAAAGACAA AGAGAAGCTC
GCCGAGATCA TCGGCAATTA CGACGGCCTG GCGATTCGCT CGGCCACCAA GGCGACCGCG
AAGATTCTCG AAAAGGCCAC CCGGCTGAAG GTGATCGGCC GCGCCGGCAT CGGCGTCGAC
AACGTCGAAA TCCCCGCCGC GACCGCCAAG GGCGTGATCG TGATGAACAC GCCGTTCGGC
AATTCGATCA CCACCGCCGA GCACGCCATC ACCATGATGC TGGCGCTGGC CCGCGAGATC
CCGGCGGCCG ACGCCTCGAC CCAGGCCGGC AAGTGGGAGA AGAACCGCTT CATGGGCGTC
GAGATCACCG CCAAGACGCT CGGCGTGATC GGCTGCGGCA ATATCGGCTC GATCGCCGCC
GACCGCGCGC TCGGCCTGAA GATGAAGGTG ATCGCGTTCG ATCCGTTCCT GTCGCCGGAG
CGCGCGCGCG ATCTCGGCGT CGAGAAGGTC GAGCTCGAAG ACCTGTTCAA GCGCGCCGAT
TTCATCACGC TGCACACCCC GCTCACCGAC AAGACCAAGA ACATCATCGA CGCCGCCGCC
ATCGCCAAGA TGAAGAAGGG CGTCCGCATC ATCAATTGTG CCCGCGGCGG TCTGGTCGAC
GAGCAGGCGC TCGCCGAGGC GCTGAAGTCC GGCCAGGTCG CCGGCGCGGC GTTCGACGTG
TTCTCCGAAG AGCCGGCGAC CAGCAACGTG CTGTTCGGCC TGCCCAACGT GATCTGCACC
CCGCATCTCG GCGCCTCGAC CACCGAAGCG CAGGAGAACG TCGCGCTGCA GGTCGCCGAA
CAGATGAGCG ACTATCTGCT CAACGGCGCC ATCACCAACG CCGTCAACTT CCCGTCGATC
ACCGCCGAAG AAGCGCCGAA GCTGAAGCCG TTCATCGAGC TGGCCGAAAA GCTCGGCTCG
TTCGCCGGCC AATTGACCGA AACGGGCATC ACCAAGGTCA CCATCACCTA CGAGGGTGAA
GTCGCCGAGA TGAAGATCAA GGCGCTGACC TCCGCGGTGC TGTCGGGTCT GCTGCGGCCG
ATGCTGGGCG ACATCAACGT CGTCTCCGCG CCGGTGATCG CCAAGGAGCG CGGCATGGTG
GTGGACGAGA TCGTCCGCGC CGCCGAGAGC GACTACGAGA GCCTGATCAC CCTGACGGTC
GCCACCGAGA AGCAGGAACG CTCGGTGTCC GGCACCGTCT ATGCCGACGG CAAGCCGCGC
CTGGTCGACA TCAAGGGCAT TCGCGTCGAC GCCGAATTCG GCCAATCGAT GATCTACGTC
ACCAACGAGG ACAAGCCGGG CTTCATCGGC AAGTTCGCGA GCCTGCTGGG TGACGCCAAG
GTCAACATCG CCACCTTCAA TCTCGGCCGC CACAGCCAGG GCGGCGACGC CATCGCGCTG
GTCGAGATCG ACGGCCCGGC GCCCGCCGAC GTCATCGCCA AGGTGCAGGC GCTGCCGCAG
GTGAAGCAGG CCAAAGCGCT GGCGTTCTGA
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| Protein sequence | MTAPKVLISD ALSEAAVQIF KDRGIDVDFQ PALGKDKEKL AEIIGNYDGL AIRSATKATA
KILEKATRLK VIGRAGIGVD NVEIPAATAK GVIVMNTPFG NSITTAEHAI TMMLALAREI
PAADASTQAG KWEKNRFMGV EITAKTLGVI GCGNIGSIAA DRALGLKMKV IAFDPFLSPE
RARDLGVEKV ELEDLFKRAD FITLHTPLTD KTKNIIDAAA IAKMKKGVRI INCARGGLVD
EQALAEALKS GQVAGAAFDV FSEEPATSNV LFGLPNVICT PHLGASTTEA QENVALQVAE
QMSDYLLNGA ITNAVNFPSI TAEEAPKLKP FIELAEKLGS FAGQLTETGI TKVTITYEGE
VAEMKIKALT SAVLSGLLRP MLGDINVVSA PVIAKERGMV VDEIVRAAES DYESLITLTV
ATEKQERSVS GTVYADGKPR LVDIKGIRVD AEFGQSMIYV TNEDKPGFIG KFASLLGDAK
VNIATFNLGR HSQGGDAIAL VEIDGPAPAD VIAKVQALPQ VKQAKALAF
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