Gene RPB_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1307 
SymbolglmM 
ID3908180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1488646 
End bp1489998 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID637883201 
Productphosphoglucosamine mutase 
Protein accessionYP_484928 
Protein GI86748432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.537701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.197279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA GATATTTCGG GACGGACGGC ATTCGCGGCC GCGCCAACGG TCTGATCACG 
CCGGAGCTGG CGTTGAAGGT CGGGCAGGCG GCGGGTCTGG TGTTTCAGCG CGGCGACCAT
CGCCACCGGG TGGTGATCGG CAAGGATACG CGGCTGTCCG GCTACATGAT CGAGAACGCG
ATGGTGGCCG GCTTCACCTC GGTCGGCATG GACGTGCTGC TGGTCGGCCC GATGCCGACG
CCGGCGGTGG CGATGCTGAC CAAATCGATG CGCGCCGACC TCGGCGTGAT GATTTCCGCG
TCGCACAATA TGTTCGAGGA CAACGGCATC AAGCTGTTCG GCCCGCTCGG CTTCAAGCTC
TCGGACGACG TCGAGAAGCA GATCGAGCAG CTGCTCGACG AGCCGATGGA CAAGAAGCTG
TCGGAGAGCG CCAGCCTCGG CCGCGCCCGC CGCATCGACG GCGTCCACGA CCGCTACATC
GAATTCGCCA AGCGCACGCT GCCGCGCGAT CTGTCGCTCG ACGGGCTGCG CGTGGTGGTC
GATTGCGCCA ACGGCGCCGC CTACAAGGTG GTGCCCGAGG CGCTGTGGGA ACTCGGCGCC
GACGTGATTT CGATCGGGGT CGAGCCGGAC GGCTTCAACA TCAACAAGGA ATGCGGCTCG
ACCTCGCCGG AAGCGCTGTG CCGCAAGGTC CGCGAGATGC GTGCCGATAT CGGCATCGCG
CTCGACGGCG ACGCCGATCG CGTCATCATG GTCGACGAGC GCGGCCACGT CATCGACGGC
GATCAGTTGC TGGCGGTGAT CGCGCAGAGC TGGAAGGAAG ACGGTCGGCT GGCACGGCCC
GGCATCGTCG CCACCGTGAT GTCGAATCTC GGGCTGGAGC GCTTCCTCGC CTCCGAGGGC
ATCGAGCTGG TGCGCACCTC GGTCGGCGAC CGCTACGTGC TCGAGGCGAT GTTGCGGGAC
GGCTACAATG TCGGCGGCGA GGCCTCGGGC CACATCATCC TGTCCGACTA CGCGACCACG
GGCGACGGCT TCGTTGCCGC ACTGCAGATA CTCGCCGTCG TGCAGAAGCT GGGCCGCCCG
GTGTCGGAGG TCTGCCATCG TTTCGATCCG CTGCCGCAGA TCCTCAAGAA CGTGCGTTAT
CGCGCCGGCC GGCCGCTCGA CGATGCCGGC GTGCAATCGG CGATCAGCGA TGCCGAGAAG
CGCCTCAACG GCCATGGCCG GCTGCTGATC CGTCCCTCCG GCACCGAGCC GGTGATCCGG
GTGATGGGCG AGGGCGAGGA CCGCATCATG GTCGAGGAAG TGGTCGACAC CATCGTCGAC
GCGCTCGGCA ATGCCTCGGC CGCAGCCGCG TAG
 
Protein sequence
MSRRYFGTDG IRGRANGLIT PELALKVGQA AGLVFQRGDH RHRVVIGKDT RLSGYMIENA 
MVAGFTSVGM DVLLVGPMPT PAVAMLTKSM RADLGVMISA SHNMFEDNGI KLFGPLGFKL
SDDVEKQIEQ LLDEPMDKKL SESASLGRAR RIDGVHDRYI EFAKRTLPRD LSLDGLRVVV
DCANGAAYKV VPEALWELGA DVISIGVEPD GFNINKECGS TSPEALCRKV REMRADIGIA
LDGDADRVIM VDERGHVIDG DQLLAVIAQS WKEDGRLARP GIVATVMSNL GLERFLASEG
IELVRTSVGD RYVLEAMLRD GYNVGGEASG HIILSDYATT GDGFVAALQI LAVVQKLGRP
VSEVCHRFDP LPQILKNVRY RAGRPLDDAG VQSAISDAEK RLNGHGRLLI RPSGTEPVIR
VMGEGEDRIM VEEVVDTIVD ALGNASAAAA