Gene RPB_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1304 
Symbol 
ID3908177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1485956 
End bp1486771 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID637883198 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_484925 
Protein GI86748429 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.285704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGCAACGCGC CGTACAGACT GCTTCGAGCG AAGTGCTCTA TGCCGTCGAA 
GACCACATCG CCACCATCAC ACTGAACGCG CCGGAGCGGA TGAACACCAT CTCCGGGCCG
ATGCTGAACG AGCTGGCGGC GCTGCTGCTC AGGGCCAATG AAGACGCCGA CGTGCGCTGC
GTGATCCTCA CCGGCAATGG CCGCGCGTTC TGCGCCGGGC TCGATTTGCG CAAGGAGCGC
GGCGACGAAG GGCTCAGCGC GGCGTCGTCG CCGACCACGC TGGATCTGCG CAGCACCCCG
CCGACCGTGC TGCAGGCGAT GGACAAGCCG ACGATCTGCG CGGTGAACGG CGGCGCCGCC
GGCTACGGCA TGGACACCGC GCTCGGCTGC GACATCCGCA TCATGGCGGA ATCCGCCAAG
CTCGCCGCGG CCTTCGTCAA GCGCGGCGTG GTGCCGGAAT CCGGCGGCAC CTGGTTTCTG
CCGCGGATGA TCGGCTGGGC GAAGGCCGCC GAGTTGATCT TCACCGGCCG CACGCTGAGC
GCGCGCGAGA GTCTCGACTG GGGGCTCGCC AACGAAGTGG TGCCCGATTC CGAGCTGATG
GGCCGCGCCC GCGCGGTGGC GAAGGAGATC GCCGGCAACG CGCCGCTGGC GGTGCAGGCC
GCCAAGCGAA TGATGCGGAT CGGCCTCAAC GAGACCTTCC CCGATCACGT CCATCACGTC
TATCTGCAAC TGCTGCCGCT GTTCAAGACG CAGGACATGG CCGAAGGCAT CAAGGCCTTC
ATGGAAAAAC GCGAGCCGAA ATTCGTCGGT CGCTGA
 
Protein sequence
MTDTQRAVQT ASSEVLYAVE DHIATITLNA PERMNTISGP MLNELAALLL RANEDADVRC 
VILTGNGRAF CAGLDLRKER GDEGLSAASS PTTLDLRSTP PTVLQAMDKP TICAVNGGAA
GYGMDTALGC DIRIMAESAK LAAAFVKRGV VPESGGTWFL PRMIGWAKAA ELIFTGRTLS
ARESLDWGLA NEVVPDSELM GRARAVAKEI AGNAPLAVQA AKRMMRIGLN ETFPDHVHHV
YLQLLPLFKT QDMAEGIKAF MEKREPKFVG R