| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1292 |
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| Symbol | |
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| ID | 3908165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1474577 |
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| End bp | 1475119 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637883186 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_484913 |
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| Protein GI | 86748417 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.280539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAC TCGCCGCGGC GATCACCCGC CTCAACGCCT GGGTCGCCAG AATTGCCGCG
TGGTTGATCG TCCCGATCTT TCTGCTGCTG ATGGCCGACG TGATCATGCG CTACCTCGTC
GGCAGCGCCG CGATCTGGAC CGCCGAGTTC GCGCAACTGA TTTTCGGCGT CTACGCGGTG
GTCGCCGGCG GCTATCTGCT GTCGGAGCGG GCGCATGTCA GCGTCGACAT CTTCTACGGC
AAATTCTCCC GCGTGCGGAA AGCGAAGGTC GATCTCGCGA CCTCTGTTCT GTTCTTCCTG
TTCGTCGGCG TGCTGATCTG GCAGAGCGCC GACATGGCGT GGGAGTCCAT GGCAAAGATG
GAGTCCAGCT ATAGCATCTG GAATCCGTAC ATCTGGCCGG TCAAGCTCGC TATCCCCATC
GCGGGCGTGC TGCTGCTGCT GCAGGGGCTG GTGCGTGTCG CCTCCGACAT CCGCACCGTG
GCCGGATACG AGAACGACCC CGAAACGTTC GGCAAGCAGG CCGGCGACGA TCCCTCTCAC
TGA
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| Protein sequence | MLKLAAAITR LNAWVARIAA WLIVPIFLLL MADVIMRYLV GSAAIWTAEF AQLIFGVYAV
VAGGYLLSER AHVSVDIFYG KFSRVRKAKV DLATSVLFFL FVGVLIWQSA DMAWESMAKM
ESSYSIWNPY IWPVKLAIPI AGVLLLLQGL VRVASDIRTV AGYENDPETF GKQAGDDPSH
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