Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1262 |
Symbol | |
ID | 3909196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1444747 |
End bp | 1445409 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883156 |
Product | hypothetical protein |
Protein accession | YP_484883 |
Protein GI | 86748387 |
COG category | [C] Energy production and conversion |
COG ID | [COG4237] Hydrogenase 4 membrane component (E) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0296387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGGC TCGCTTTCGA CATTTCACAT TCGCTGGCCG GCGGCCTGGT GCTGGTGTCG TTCATGATGC TGTATCAGGA CCGGTTGACC TCGCTGCTCA ATGTGTTCGC GTTGCACGCG ATCATGCTGT CGCTGGCGGT GGGGTGGCAG GCGCTGATCC AGGACGCGCC GCATCTCTAC GTCACCGCGC TGATCGCGCT GCTGTTCAAG GCGATCATCA TTCCGGTGGC GCTGCGCCGG ATCGTCTACA AGCTCGGCAT CCACCGCGAC ATCGAGACCG TGGTCGGGAT CGGCCCGACC ATGCTGGCCG GGATGGGGCT GGTGGCGCTG TCGCTGGCGC TGATGCTGCG CGTCACCGCC GACGCCGACG CGCTGGCGCG GGAGGATCTC GCGTTTGCGC TCTCCGTCGT GCTGCTCGGG CTGTTGTTCA TGGTGACGCG GCGCAACGCG GTCAGCCAGG TGATCGGCTT CATGTCGCTG GAGAACGGGC TGATCCTCGC CGCCGCCGGC GCCAAGGGCA TGCCGCTGGT GGTCGAGATC AGCGTCGCGT TTTCGGTGCT GATCGCCTTC ATCGTGATCG GCATCGTGCT GTTCCGGATC CGCGAACGCT TCGACTCGGT CGACGTGGCC CAGCTCGACG TCTCGCGCGG AGAGCAGCGA TGA
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Protein sequence | MHGLAFDISH SLAGGLVLVS FMMLYQDRLT SLLNVFALHA IMLSLAVGWQ ALIQDAPHLY VTALIALLFK AIIIPVALRR IVYKLGIHRD IETVVGIGPT MLAGMGLVAL SLALMLRVTA DADALAREDL AFALSVVLLG LLFMVTRRNA VSQVIGFMSL ENGLILAAAG AKGMPLVVEI SVAFSVLIAF IVIGIVLFRI RERFDSVDVA QLDVSRGEQR
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