| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1250 |
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| Symbol | |
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| ID | 3909184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1428795 |
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| End bp | 1429724 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883144 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_484871 |
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| Protein GI | 86748375 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.886948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAATG ATCTGAAGAA GCGCGATATC GTGCTCGTCG TCGACGACTC GCCGGAGACG
CTGCGGATGC TGACCGACGC GCTCGACGGC GCCGGCATGA CCGTGATGGT CGCGCTCGAC
GGCGCCGCGG CGATGCGGAT CGTCGAGCAG ATCACGCCGG ACATCGTCCT GCTCGACGCC
ATCATGCCGG GCCTCGACGG CTTCGAGACC TGCCGGCGGC TGAAGCGCAA TCCCGCCGTC
TCCGACGTGC CGGTGATCTT CATGACCGGC CTCGCCGAGA GCGAGCACAT CGTCCGCGGC
CTGGAGGCCG GCGGCGTCGA CTACGTCACC AAGCCGATCG TGATCGTCGA AATGCTGGCG
CGGATCCGGG TGCATCTCGG CAATGCGCGG CTGAGCCAGA GCGCGCGCGC CGCACTCGAC
GTGTCCGGCC GCTTCCTGCT CGCGGTCGAT CGCGTCGGCA AGGTGCTGTG GGCGACGCCG
CAGGCGCAGA AGCTGCTCGC CGCCGACGGC GCCTCGGCCG AAGGCTTCCG GCTCGATCTG
CCGAAGCCCT GGCTCGACTG GCTGGAGCAG GTGCACAGCG GCCTCGCCCA GCCGAAGACG
CCGATGAAGG CGTCGCTGCT GCGCAACGAC GAATTGCGGC TGCAATATAT GGGCAAGCTC
GGGCCGAACG AATTCCTGCT GCGGCTGGCG CGCGACACCT CCGGCGAATC GCCGAAGGAA
TTCACCACCG AGTTCGGTCT CACCAGCCGC GAGAGCGAAG TGCTGGCGTG GCTCAGCAAG
GGCAAGACCA ATCGCGACAT CGCGCAGATT CTGGGGCTCA GCCCGCGCAC GGTCGACAAG
CACCTCGAGC AGATCTACGC CAAGCTCGGC GTCGAAAACC GCACCGCGGC GGCGGCGATC
GCCACCAGCG CCAGCCGGCG GGATTCGTAA
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| Protein sequence | MTNDLKKRDI VLVVDDSPET LRMLTDALDG AGMTVMVALD GAAAMRIVEQ ITPDIVLLDA
IMPGLDGFET CRRLKRNPAV SDVPVIFMTG LAESEHIVRG LEAGGVDYVT KPIVIVEMLA
RIRVHLGNAR LSQSARAALD VSGRFLLAVD RVGKVLWATP QAQKLLAADG ASAEGFRLDL
PKPWLDWLEQ VHSGLAQPKT PMKASLLRND ELRLQYMGKL GPNEFLLRLA RDTSGESPKE
FTTEFGLTSR ESEVLAWLSK GKTNRDIAQI LGLSPRTVDK HLEQIYAKLG VENRTAAAAI
ATSASRRDS
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