Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1232 |
Symbol | |
ID | 3909166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1409893 |
End bp | 1411716 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883126 |
Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_484853 |
Protein GI | 86748357 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACAC CTTGGCAGGC CGCGGCGGCG CAGAAGAATT CCGCGAGGGA GCTGCGCCCG CTGACCGGCA ACGAGGCGAT CGCGCGCGCC GCCTGGGAGG CGGGCGTCCG GGTCGCCGCC GCCTATCCCG GCACGCCGAG CACCGAAATT CTCGAAAGTC TCGCGACCTA TCCTGCCGAG GATTTGCACG CCCAGTGGTC GACCAACGAG AAGGTCGCGC TCGACGTCGC GCTCGGCGCG TCGTTCGCGG GCAGCCGCGC GCTGTGCGCG ATGAAGCATG TCGGTCTCAA CGTCGCCGCC GATGCGTTCA TGACGTCGAC CTATATCGGC GTCAACGGCG GGCTGGTGCT GGTCGTCTGC GACGATCCCG GCATTCATTC GTCGCAGAAC GAGCAGGACA GCCGGATCTA TGGTCAGCTC GCCAGCGTTC CGGTCCTGGA GCCGAGCGAT GCGCAGGAGG CCTACGACCT CACCAGATTG GCGTTCGACC TCTCCGAGGA ATTCGACACG CCGGTGATCG TCCGCAGCAC CACCCGGTTG TCGCATACCC GCAGCACGGT CACGGTCGGC GCGCGCGCCG ACATCGCCTC GCGCGGCTTC GTCGAGAGGC CGTCGAAGAA CGTGATGATC CCGGCCCACG CCCGCGCCCG CCACCTCGTG GTGCTGGAGC GCGAGGCGAA GCTGAAGGAC TATTTCGCGG CCTCGGCGAT CACCCGATGG GAGACCGGCG ACAGCAGCTT CGGTATCGTC ACCGCCGGCA CCTGCTATCC CTATGTCCGC GAGGTGCTGC CCAACGCCAC CGTGCTGAAG CTCGGCGCGT CGTGGCCGCT GCCGGAACAA TTGCTGCGCG ATTTCTGCGC CTCGGTCGAC CGCGTCTTCG TGGTCGAGGA GCTGGAGCCG ATCATCGAAA AAGAGATCGC GGCACTCGGT ATCAAGGTCG AGGGCAAGCG CTTCTTCCCG CGCGCCGGCG AGTTCTCGCC GGAAGTAGTG CGGGGCGGGC TGGTGCAGGC CGGCATCCTG CCGGCGCCGC CGTCGCTGAA TGCCTGGGTG CCGGAGCCGG TGGTGCGGCC GCCGGTGCTG TGCGCCGGCT GTCCGCACAC ATCGAGCTTC ATGGCGGTGC GCGCCTCCGG CGCCCGCGTC GCCGGTGACA TCGGCTGCTA CACGCTGGCG GTGCTCGATC CCTTGCGCGG CATCGACACC TGCGTGTCGA TGGGCTCGTC GATCGGCAAC GCCGTCGGCA TGGCCAAGGC CGGCGAGACC AAGCCGGTCG TCGCCACCAT CGGCGACTCG ACCTTCCTGC ATGCCGGCAT CCCGGCGCTG ATCGACGCGG TCTACAACCA GGCCAATATT GCGGTCATGC TGCTCGACAA CCACATCACG GCGATGACCG GCGGCCAGGA GCATCCCGGC ACGGGCAAGA CGCTGCGCGG CGACCCAGCG CCGCAGATCA ACTACGAGGC GCTGATCCGC GCCTGCGGCG TGCAGTGGGT GAAGACGGTC GACAGCTACG ATCTCGCCGC CACCCATCAG GCGCTGCGCG AGGCCATCAA TTTTCGCGGC GTCGCGGTGC TGATTTCGAA CCGGCCCTGC GTGCTCGATC CGATCAAGAT CAAGGGGCCG CCGCTCGAAG TCGTGACCAG CCAGTGCACC GCCTGCCAGT CCTGCATGAA TCTCGGCTGC CCGGCGCTGA CCTGGAGCGA CGAATGGTTC GAGGGCCGCC ACCGGGTCAA GATCGATCCG GCGCTGTGCA TCGGCTGCAC GCTGTGCGCC CAGGTCTGCA CCATCGACTG CATCAAGATC GCAACGCCTC CGGTGACGCC ATGA
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Protein sequence | MHTPWQAAAA QKNSARELRP LTGNEAIARA AWEAGVRVAA AYPGTPSTEI LESLATYPAE DLHAQWSTNE KVALDVALGA SFAGSRALCA MKHVGLNVAA DAFMTSTYIG VNGGLVLVVC DDPGIHSSQN EQDSRIYGQL ASVPVLEPSD AQEAYDLTRL AFDLSEEFDT PVIVRSTTRL SHTRSTVTVG ARADIASRGF VERPSKNVMI PAHARARHLV VLEREAKLKD YFAASAITRW ETGDSSFGIV TAGTCYPYVR EVLPNATVLK LGASWPLPEQ LLRDFCASVD RVFVVEELEP IIEKEIAALG IKVEGKRFFP RAGEFSPEVV RGGLVQAGIL PAPPSLNAWV PEPVVRPPVL CAGCPHTSSF MAVRASGARV AGDIGCYTLA VLDPLRGIDT CVSMGSSIGN AVGMAKAGET KPVVATIGDS TFLHAGIPAL IDAVYNQANI AVMLLDNHIT AMTGGQEHPG TGKTLRGDPA PQINYEALIR ACGVQWVKTV DSYDLAATHQ ALREAINFRG VAVLISNRPC VLDPIKIKGP PLEVVTSQCT ACQSCMNLGC PALTWSDEWF EGRHRVKIDP ALCIGCTLCA QVCTIDCIKI ATPPVTP
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