Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1225 |
Symbol | |
ID | 3910160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1401931 |
End bp | 1403061 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637883119 |
Product | carboxypeptidase |
Protein accession | YP_484846 |
Protein GI | 86748350 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAG CAAATCTGCC GTTTGATTCC GAAGCCATGC TGCAAGGCCT GCGCGCCTGG GTCGAGTGCG AAAGCCCGAC CTGGGACAAA GCCGCCGTCG AGCGCATGCT CGACCTCGCC GCGCGCGACA TGGCGGTGAT GGGTGCGTCG ATCGAACGCA TCGCCGGACG GCAGGGCTTC GCCGGCTGTG TTCGCGCACG CTTTCCGCAC CCGCGGCAGG GCGAGCCCGG CATCCTGATC GCCGGCCATC TCGACACCGT GCATCCGGTC GGCACGATCG AGAAACTGCA ATGGCGCCGC GACGGCAACA AATGCTACGG CCCGGGCATC TTCGACATGA AGGGCGGCAA CTATCTGACG CTCGAAGCCA TCCGCCAGCT CGCGCGCGCG TCGTTCACGA CGCCGCTGCC GGTCACCGTG CTGTTCACGC CGGACGAGGA AGTCGGCACG CCCTCGACCC GGGACATCAT CGAGGCGGAG GCCGCCCGCA ACAAATACGT GCTGGTGCCG GAGCCCGGCC GCCCCGACAA CGGCGTCGTC ACCGGCCGCT ACGCGATCGC GCGATTCAAT CTGACGGCGA CCGGCAAGCC CAGCCACGCC GGCGCGACGC TGTCCTCGGG ACGTTCCGCG ATCCGGGAAA TGGCGCGGCA GATATTGGCG ATCGACGCGA TGACGACGGA GGACTGCACG TTCAGCGTCG GCATCGTGCA CGGCGGACAA TGGGTCAATT GCGTCGCCAC CACCTGCACC GGCGAGGCGC TCAGCATGGC GAAGCGGCAG GCCGATCTCG ACCGCGGCGT CGAACGGATG CTGGCGCTGT CCGGCACCAG CAACGACGTC GGCTTCGAAG TGACGCGCGG CGTGACGCGG CCGGTCTGGG AGCCCGACGC CGGCACCATG GCGCTGTACC AGAAGGCGGC CGCGATCGCC GACCAGCTCG GGCTGAAGCT GCCGCACGGC AGCGCCGGCG GCGGTTCCGA CGGCAACTTC ACCGGCGCGA TGGGGATCCC GACTCTCGAC GGCCTCGGCG TGCGTGGCGC CGACGCCCAC ACGCTGAACG AGCATATCGA AGTCGATAGT CTGGCGGAAC GCGGGCGCCT GATGGCCGGG CTGCTCGCGA CTCTCGCATG A
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Protein sequence | MNPANLPFDS EAMLQGLRAW VECESPTWDK AAVERMLDLA ARDMAVMGAS IERIAGRQGF AGCVRARFPH PRQGEPGILI AGHLDTVHPV GTIEKLQWRR DGNKCYGPGI FDMKGGNYLT LEAIRQLARA SFTTPLPVTV LFTPDEEVGT PSTRDIIEAE AARNKYVLVP EPGRPDNGVV TGRYAIARFN LTATGKPSHA GATLSSGRSA IREMARQILA IDAMTTEDCT FSVGIVHGGQ WVNCVATTCT GEALSMAKRQ ADLDRGVERM LALSGTSNDV GFEVTRGVTR PVWEPDAGTM ALYQKAAAIA DQLGLKLPHG SAGGGSDGNF TGAMGIPTLD GLGVRGADAH TLNEHIEVDS LAERGRLMAG LLATLA
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