| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1209 |
|---|
| Symbol | |
|---|
| ID | 3910144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1382445 |
|---|
| End bp | 1383215 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637883103 |
|---|
| Product | anti-sigma factor |
|---|
| Protein accession | YP_484830 |
|---|
| Protein GI | 86748334 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.736755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC CCGAGATCCC CGTGACCGAA GACGAACTGC ACGCCTATGT CGACGGCGAA
CTGCCGGCCG AGCGGCGCGG CGACGTCGAG GCTTGGCTGG CGACGCATCC GGCGGACGCC
GAACGCGTCG CGTCGTGGCG CGCGATGGCC GAGGCGCTGC ACGCCCGCTA CGACCGGGTG
CTCGACGAGC CGGTGCCGCC GCGGCTGCAA CTCGCCCGGC TGGAGAGCCC ACCGCGACGC
TGGATCGCCG GCGCCATCGC GGCGACGCTG GCGGCGTTCA TCGCCGGCGG CGGCGCGGGC
TGGTTCGCAC ACGGCGCGGC GGCAACGCCG AACGCCTTCC GCAGCTTCAC CGTCGATGCG
CTCGATGCGC ACCGGCTCTA CGTCGTCGAG GTTCGCCACC CCGTCGAGGT CGAGGGCTCC
GAACGCGCAC ATCTGCAGCA ATGGCTGTCG AAGCGCGTCG GTTATCCGGT CAAGGCGCCC
GAACTCGAAG GCAGTGGGCT GAAGCTGATC GGCGGGCGGC TGCTGCCCGG GCCCGACGCC
CCGGCGGCGT TCCTGATGTA CGAGAGCGCC AACGGCGAGC GCTTCACGCT GTACACCTCC
CGTGCCGATA CCGACACGAC GCAGATGCGC TACGCCAGCG ATCACCGCGA CGGCGCGATG
TTCTGGGCCG ATCGCGGCGT CGGCTACGTG CTGTCGGGTC CGATCGACAA AGAGCGACTG
CGCCAGGTGG CGCAGCAGGT CTACGCGCAG ACCGACAGCA ACGGCGGTTA G
|
|---|
| Protein sequence | MTDPEIPVTE DELHAYVDGE LPAERRGDVE AWLATHPADA ERVASWRAMA EALHARYDRV
LDEPVPPRLQ LARLESPPRR WIAGAIAATL AAFIAGGGAG WFAHGAAATP NAFRSFTVDA
LDAHRLYVVE VRHPVEVEGS ERAHLQQWLS KRVGYPVKAP ELEGSGLKLI GGRLLPGPDA
PAAFLMYESA NGERFTLYTS RADTDTTQMR YASDHRDGAM FWADRGVGYV LSGPIDKERL
RQVAQQVYAQ TDSNGG
|
|---|
| |