Gene RPB_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1198 
Symbol 
ID3910133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1372913 
End bp1373545 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID637883092 
Producthypothetical protein 
Protein accessionYP_484819 
Protein GI86748323 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.792067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.949639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTATG CGGTCAAAGA GATCTTCCTC ACCCTGCAGG GCGAAGGCGC GCATGCCGGT 
CGCGCATCGG TGTTTTGCAG GTTCGCGGGA TGCAATCTGT GGACAGGCCG CGAGCAGGAT
CGCCATGACG CGGTCTGCCA GTTCTGCGAT ACCGACTTCG TCGGCACCGA CGGCACGCTC
GGCGGGCGCT ACGGTGACGC CGGGAAACTC GCCGATACCA TCGCCGCGCA ATGGGTCGGC
GCCGACACCG ATCGCTACGT TGTGATTACC GGCGGCGAAC CGTTGCTGCA GCTGGACGCA
GAACTAATTG ATGCACTGCA CAAGCAGGGC TTCGAGGTCG GAGTCGAAAC CAATGGCACG
ATCGAGCCGC CTGCCGGGAT CGACTGGCTT TGTGTGAGCC CAAAAGCCGG TACCCAGATA
CGCGTGCAGT GCGGCAATGA ACTCAAGCTA GTCTATCCGC AGCCGGACGC CATGCCGGAA
CAGTTCACGA GCCTGGATTT CGAGCGGTTT TCGCTGCAGC CGATGGACGG CCCCGACCGG
GACGACAATA CCCGCCGCGC GATCGACTAT TGCCTGCGCC ACCCACAATG GCGGCTCAGC
GTGCAGACCC ACAAGGTGAT CGGGATCAGG TAG
 
Protein sequence
MSYAVKEIFL TLQGEGAHAG RASVFCRFAG CNLWTGREQD RHDAVCQFCD TDFVGTDGTL 
GGRYGDAGKL ADTIAAQWVG ADTDRYVVIT GGEPLLQLDA ELIDALHKQG FEVGVETNGT
IEPPAGIDWL CVSPKAGTQI RVQCGNELKL VYPQPDAMPE QFTSLDFERF SLQPMDGPDR
DDNTRRAIDY CLRHPQWRLS VQTHKVIGIR