Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1147 |
Symbol | |
ID | 3909235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1319719 |
End bp | 1320444 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883041 |
Product | aspartate racemase |
Protein accession | YP_484768 |
Protein GI | 86748272 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.718342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.712603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGA CGATCGGCCT GATTGGCGGC ATGAGCTGGG AGAGCACGGC GGTGTATTAT CGCCGGCTCA ACGAACAGGT GCGCAAGGCG CGCGGCGGGC TGCATTCCGC CGAGATCCTG CTGCGCTCGG TCGATTTCGA CACCATCGTC GCGCTGCAGA CCGCCGGCGA TTGGGACGGC GCCACGCGCG TGCTGCAGAA GATCGCCCGC GAATTGCAGG CCGCCGGCGC CGATTGCGTG CTGATCTGCA CCAATACGAT GCACAAGCTC GCCGACGCGG TGCAAAGCGC GATCGACATC CCGCTTTTGA ACATCATCGA CATCTGCGCG CAGGAATTGA AGCAGGCCGG CGCCCGCAAG CCGCTGCTGC TGGCGACGCG CTACACCATG GAACACGATT TCTATCGCGA GCGGATGCGC CGCCGCCACG GCATCGAGAC CCTCGTGCCC GAGGCCGACG ATCGCAGCGC GGTTCACGAC GTCATCTTCA CGGAACTGTG CTGCGGAATC ATCCGCGACG CCTCGCGGCA GCGCTACATG GAGATCATCG CGAAGGGCCG CGCCGCGGGT GCCGACAGCG TGATTCTCGG CTGCACCGAG ATCGGCCTCT TGATCCAGCC GGAGAACATT GATCTACCGG CTTACGACTC GACGCTGCTG CACGCCGATG CGGCGGTCGA CTTCGCACTC GGCAGCGGCC CGCTCGGCCG CGCCGACGCA GCCTAA
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Protein sequence | MMKTIGLIGG MSWESTAVYY RRLNEQVRKA RGGLHSAEIL LRSVDFDTIV ALQTAGDWDG ATRVLQKIAR ELQAAGADCV LICTNTMHKL ADAVQSAIDI PLLNIIDICA QELKQAGARK PLLLATRYTM EHDFYRERMR RRHGIETLVP EADDRSAVHD VIFTELCCGI IRDASRQRYM EIIAKGRAAG ADSVILGCTE IGLLIQPENI DLPAYDSTLL HADAAVDFAL GSGPLGRADA A
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