Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1130 |
Symbol | |
ID | 3909217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1298242 |
End bp | 1299021 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883023 |
Product | hypothetical protein |
Protein accession | YP_484751 |
Protein GI | 86748255 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0207355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.486659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGCC GCTTTGTCAT GACTTCGGCA CCTGCCGCGA TCCGCGATGC GTTCGGCTAT GCCGATCAGC CGAACTTTCC AGCGCGCCAC AATATCGCGC CCACCCAGCC GGTTCCGGTG GTGATCGTCG ACGCGGGGGC GCGCCGCTTC CGCCTGATGC GCTGGGGTTT TTTGCCGTCC TGGGCGAAGG ATCCGCGAAA ATTCACGCTG CTGATCAATG CCCGCGCCGA GACGCTGCTG GAGAAGCCCG CGTTCCGGAA CGCGGTCAGG CGGCGGCGCT GCCTGGTCCC CAGCGACGGC TACTATGAGT GGAAAACGGT GGGCACACGC AAGCAGCCGT ATTTCATCCA TCCCGCCGGT GGCGGGCCGA TCGGCTTCGC CGGCTTGTGG GAGACCTGGG TCGGGCCGAA CGGCGAAGAG CTCGACACCA TCGCGATCGT CACAACGGCC GCGCGCGAGG GCATGACTGA GCTTCACGAC CGCGTCCCGG TGACGATCGC GCCGCAGGAC TACGCGGCCT GGCTCGATTG CGCCGAGGTC GACGCGGAGA GCGCCGCCGC GCTGCTGCGC GCCCCCCTGG CCGGCACCTT CGTCTGGTAT CCGGTGTCGA CTGCCGTCAA CCGCGTCGCC AACGACAATC CGCAATTGAT CCTGCCGATT TCGGACGAGG AGATACTCTC CGAGGCGCCG GTTGGAGCGC AGAAAAGCGC TCGGACCAGG CCGGCCGCGA AGCCCAAGGC CGCGGCCTCC GATGATGGCG GGCAGGGGTC GCTGTTTTAG
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Protein sequence | MCGRFVMTSA PAAIRDAFGY ADQPNFPARH NIAPTQPVPV VIVDAGARRF RLMRWGFLPS WAKDPRKFTL LINARAETLL EKPAFRNAVR RRRCLVPSDG YYEWKTVGTR KQPYFIHPAG GGPIGFAGLW ETWVGPNGEE LDTIAIVTTA AREGMTELHD RVPVTIAPQD YAAWLDCAEV DAESAAALLR APLAGTFVWY PVSTAVNRVA NDNPQLILPI SDEEILSEAP VGAQKSARTR PAAKPKAAAS DDGGQGSLF
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