Gene RPB_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1130 
Symbol 
ID3909217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1298242 
End bp1299021 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID637883023 
Producthypothetical protein 
Protein accessionYP_484751 
Protein GI86748255 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0207355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.486659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCC GCTTTGTCAT GACTTCGGCA CCTGCCGCGA TCCGCGATGC GTTCGGCTAT 
GCCGATCAGC CGAACTTTCC AGCGCGCCAC AATATCGCGC CCACCCAGCC GGTTCCGGTG
GTGATCGTCG ACGCGGGGGC GCGCCGCTTC CGCCTGATGC GCTGGGGTTT TTTGCCGTCC
TGGGCGAAGG ATCCGCGAAA ATTCACGCTG CTGATCAATG CCCGCGCCGA GACGCTGCTG
GAGAAGCCCG CGTTCCGGAA CGCGGTCAGG CGGCGGCGCT GCCTGGTCCC CAGCGACGGC
TACTATGAGT GGAAAACGGT GGGCACACGC AAGCAGCCGT ATTTCATCCA TCCCGCCGGT
GGCGGGCCGA TCGGCTTCGC CGGCTTGTGG GAGACCTGGG TCGGGCCGAA CGGCGAAGAG
CTCGACACCA TCGCGATCGT CACAACGGCC GCGCGCGAGG GCATGACTGA GCTTCACGAC
CGCGTCCCGG TGACGATCGC GCCGCAGGAC TACGCGGCCT GGCTCGATTG CGCCGAGGTC
GACGCGGAGA GCGCCGCCGC GCTGCTGCGC GCCCCCCTGG CCGGCACCTT CGTCTGGTAT
CCGGTGTCGA CTGCCGTCAA CCGCGTCGCC AACGACAATC CGCAATTGAT CCTGCCGATT
TCGGACGAGG AGATACTCTC CGAGGCGCCG GTTGGAGCGC AGAAAAGCGC TCGGACCAGG
CCGGCCGCGA AGCCCAAGGC CGCGGCCTCC GATGATGGCG GGCAGGGGTC GCTGTTTTAG
 
Protein sequence
MCGRFVMTSA PAAIRDAFGY ADQPNFPARH NIAPTQPVPV VIVDAGARRF RLMRWGFLPS 
WAKDPRKFTL LINARAETLL EKPAFRNAVR RRRCLVPSDG YYEWKTVGTR KQPYFIHPAG
GGPIGFAGLW ETWVGPNGEE LDTIAIVTTA AREGMTELHD RVPVTIAPQD YAAWLDCAEV
DAESAAALLR APLAGTFVWY PVSTAVNRVA NDNPQLILPI SDEEILSEAP VGAQKSARTR
PAAKPKAAAS DDGGQGSLF