| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1117 |
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| Symbol | |
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| ID | 3910203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1285992 |
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| End bp | 1286873 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883010 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_484738 |
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| Protein GI | 86748242 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.191945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAG CCCTGCTCCC CGACCGCGGC GTGATCAAGA TCAGCGGAGC CGACGCGCGG
CATCTGCTGA ACGGGCTGGT CACCACGGAT CTGACGCTGC TCGAACCCGG GCTCGGCCGG
TTCGGCGCGC TGCTGACGCC GCAGGGCAAG ATCGTCGCCG ATTTCTTCAT CACCGAGATC
GCCGCGGAGG ACGATGGCGG TTTCCTGCTG GATTGCCCGA AAACGCTGGC GGAACCGCTC
ACCACCAAGC TGAAATTCTA TAAACTGCGC GCCAAGGTGC TGATCGAGAA CCTGTCCGAC
CGGCTCGGCG TGCTCGCCGT GTGGGACGGT GCGCCGGCCG CGACGTCGGC ACCGGCCTTT
ACCGATCCGC GCAACGACCA GCTCGGCTGG CGAATCATCG TGCCCGAACT GCTGGCGCAC
AAGACCGCCG AGGCGATCGG CGCGGAGCTG GTGGATGCCG CCGCCTATGA GGCGCATCGC
ATCGCCTGCG GTGCGCCGGC CGGCGGCGTC GACTTCGCCT ATGGCGATGC GTTTCCGCAC
GAAGCCAACA TGGACCGGCT GCACGGCGTC GATTTCGGTA AGGGGTGCTA CATCGGCCAG
GAAGTGGTGT CGCGAATGCA CCATCGCGGC ACTGCGCGCA CCCGGATCGT GCGTGTGCTG
ATCGACGGCG CGGCGCCTCA GCCGGGTAGC GAGATCACCG CCGGCGACAA GAGCGTCGGC
ACCATGGGGT CGTCGGCCGA CGGCTGCGGT CTGGCGCTGC TGCGGATCGA CCGCGTGGCG
GACGCCCGCG AAGCTTCATT GCCGCTCGGC GCCGCCGGCA TCGCGCTGCG CCTGGTCGAT
CCGGACGAGT TGAAGCCGGC TGTGCGAAAG ACCGTGGCAT GA
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| Protein sequence | MKAALLPDRG VIKISGADAR HLLNGLVTTD LTLLEPGLGR FGALLTPQGK IVADFFITEI
AAEDDGGFLL DCPKTLAEPL TTKLKFYKLR AKVLIENLSD RLGVLAVWDG APAATSAPAF
TDPRNDQLGW RIIVPELLAH KTAEAIGAEL VDAAAYEAHR IACGAPAGGV DFAYGDAFPH
EANMDRLHGV DFGKGCYIGQ EVVSRMHHRG TARTRIVRVL IDGAAPQPGS EITAGDKSVG
TMGSSADGCG LALLRIDRVA DAREASLPLG AAGIALRLVD PDELKPAVRK TVA
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