| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1116 |
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| Symbol | |
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| ID | 3910202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1285342 |
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| End bp | 1285995 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883009 |
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| Product | DNA-3-methyladenine glycosylase I |
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| Protein accession | YP_484737 |
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| Protein GI | 86748241 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.182535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGCG CACGCATGCA CGCCGACGGC CTCGCGCGCT GCCCGTGGCC GGGCGACGAT
CCGCTCTACG TCGCCTATCA CGACACCGAA TGGGGCGTGC CGGAATACGA CGACCGCGCG
CTGTTCGAGA AGCTGATCCT CGACGGCTTC CAGGCCGGGC TGTCGTGGAT CACGATCCTG
CGCAAGCGTG ACAATTTCCG CCGCGCCTTC GACGATTTCG ATCCGGCCAG GATCGCGCGC
TACGACGCGG CGAAGGTGCA GGCGCTGATG AACGACGTCG GCATCGTCCG CAACCGCGCC
AAGATCGACG GCGCGATCGG CAGCGCCAAG GCCTGGCTGA CGATCCAGGA GGAAGGCCCG
GGCTTTTCGA AACTGCTGTG GGACCATGTC GGCGGCGCGC CGAAGGTCAA CGCGTTCAAG
ACCACCTTGA GCGTGCCGGC CTCGACGCCG CTGTCGGTGA AAATCTCGAA GGATCTGTCG
GCGCGCGGCT TCAAATTCGT CGGCCCGACC ATCGTCTACG CCTTCATGCA GGCGGTGGGC
ATGGTCAACG ACCATCTGGT GGATTGCCAT TGCCACGATC GTTGCGGCGC AGCAAAAAGG
CCGGCGCGAC GTTCGGCGGC GCCGGCGCGG ACGATCGCCC AGCGTCAGCG CTGA
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| Protein sequence | MSGARMHADG LARCPWPGDD PLYVAYHDTE WGVPEYDDRA LFEKLILDGF QAGLSWITIL
RKRDNFRRAF DDFDPARIAR YDAAKVQALM NDVGIVRNRA KIDGAIGSAK AWLTIQEEGP
GFSKLLWDHV GGAPKVNAFK TTLSVPASTP LSVKISKDLS ARGFKFVGPT IVYAFMQAVG
MVNDHLVDCH CHDRCGAAKR PARRSAAPAR TIAQRQR
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