| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1110 |
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| Symbol | |
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| ID | 3910196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1277509 |
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| End bp | 1279815 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883003 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_484731 |
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| Protein GI | 86748235 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACATCG TCAGAACTAA CAAGAACCGG CTGTTCGCCG GCGTCGCGAC AGCCGTCATG
TCACTGTATT TCACCGGCAT CGCAGTTTCT CCAAGCCGAG CACAAAGCGC CGAGCCGCAC
GTGCTCCCGC CCGTCTCTGT CGAGAAGCCT CAACAGAGAG CACGGGCGGC GTCTCCGACC
CGGTCGCGCA ATCCGCAGCG ACGCTCCGCC CGGATCGCGC CCCGGCCCTC GGCCGAACCC
CCGACCAGCG CGCCAGCCGC CACAGCCGCC GCCATCCACA CCATCGGAAC GCTGCCGGTT
CCCTATGCGG GCGGCCAGGT GGCGCAGGGG GCCCGCATCG GCATGCTGGG CAATCGCAGC
TTCATGGATA CGCCGTTCGC GGTGACGGCC TACACTTCGC AGCGAATCCG GGATCAGGGC
GCGCAGACCG TCGCCGACGT TCTCGAAGCC GACCCTTCGG TGAGAAGTAC GCATTCGGCG
GGCGGATTGC TGGATTCGTT CTACATCCGG GGCTTTCCGA TCGGAGAGGG CAATCTCGGC
GAAATCGCCT TCGACGGAAT TTTCGGAATC GCGCCGACCT ATCGGGTGTT CACCGACTAC
GCCGAGCGCG TCGAAGTCCT GAAGGGGCCG ACCGCGTTCC TCTACGGCAT ATCGCCCAAC
AGCGCCGTCG GCGGCACCAT CAACATCGTC CCGAAGCGCG CCGGCGACAC CGACCTGACG
CGACTGACGA CCGACTACGC ATCCAACGCG CAGGGCGGCG GCGCCGTGGA CGTGTCGCGG
CGGTTCGGCG AGCACAAGGA ATTCGGCATC CGCTTCAACG GCAGCGCCCG CGGCGGCGAT
CTGCCGATCG ACAATCTGGA GCGCGGCGCC TTCGTCGGTT CGCTGGCGCT GGACTATCGC
GGCGAACGGT TGCGCGCCAC GCTCGACATC ATCGGTCAGC GGGAAAATCT GACGGCCCCG
CAGCGGCCGT TCTATCCGTC GTCCGGCAAT TTCGCGATAC CCAGCGCGCC GAACGGCTCG
CGGAACGTCC AGGCGCCGTG GGAATGGTCG AAGAGCGAGG ACAAGTCGGT TCTCGGCAAA
GTCGAATACG ATCTGACCGA CAACGTCACC TGGTTCGGTG CGGTCGGCGG CGGCAACTCG
CGGGTTCATC GGCTGTTCGG CCTGCCGACG ATGCTCAATT CCGCCGGCGA CGTCAGTATC
CGCCCGGAGA ACGCGATCTT CGACGTCGAT CGGCTGAGTG CGGAAACCGG CGTCCGCTCC
CGTTTCGAGA CCGGCGCGAT CGCGCATACG ATGACGCTGC AGTCGAGCTA TCTCAACCAG
ACTCTCGATC GCGGGCTCGT CTCGGGGACG ACGCAGTTCA GCAACATGTA CAATCCGGCG
TACCGCCCCG AGCAATACGT CGCCGACCCA ACCCGCGTGG CCAAGGCATC CGAGAGCACG
CTGTCGGGCG TCGCGTTGTC GGATACGTTA TCGGTGCTGA ACGAGCGCCT GCAACTCACC
GTCGGCGGCC GGTTCCAGCA GATCGACTCC AAGAACTACA ATATCAGCAC CGGCGCGCTC
ACCTCGTCGT CCGACGAGAC CGCCGTAACG CCTCTGGTCG GTCTCGTGGT TCGACCCTGG
AGCATGGTGT CGTTCTATGC GAACTACGCG GAAGGCCTGA GCATCGGTGA AACAGCGCCG
ACCAATGCGA TCAATGCCGG CGAGACCCTG GCGCCCTACA AGACCACGCA ATACGAGGTC
GGCACCAAGT TCGACCTCGG CCGTTTCGGC CTGACGCTCA GCGCGTTCCA GATCGAAAAG
CCGTTCGGCC AGCTCGAGAC CATCGGCAGC AATCTGGTGT TCAGCGAAGG CGGCGAGCAA
CGCAACCGCG GCCTCGAGCT CAACGTGTTC GGAGAAGTCA CGCCGGGCGT GCGGCTGCTC
GGCGGCGCGT CGCTGATCGA CGGTGAACTG ACCAAGACCA CGAGCGCCGC GACCCTCGGC
AACAGGCCGG TCGGCGTGCC GACGGTGCAG GCGAATCTCG GCGGCGAATG GGACACGCCG
TTCGTGTCGG GCCTGACGTT GACCGCCAAT GTCATCTACA CCGGCGAGCA ATATGTGAAC
ACGGCGAATA CGCAGATGAT CCCGTCGTGG ACCCGGATGG ATCTCGGCGC CCGCTACAAG
ACCCTGATCG ACAAGCGGCC GGTCACCTTC CGTGCCTCGG TGCAGAACGT GTTCGACAAG
GACTACTGGT CCGGCGTCGC CAGCTACAGC ACCATCGCGC AGGGCCTTCC CCTGACGGTC
CGGCTGTCGA TGACCACGGA CTTCTAG
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| Protein sequence | MNIVRTNKNR LFAGVATAVM SLYFTGIAVS PSRAQSAEPH VLPPVSVEKP QQRARAASPT
RSRNPQRRSA RIAPRPSAEP PTSAPAATAA AIHTIGTLPV PYAGGQVAQG ARIGMLGNRS
FMDTPFAVTA YTSQRIRDQG AQTVADVLEA DPSVRSTHSA GGLLDSFYIR GFPIGEGNLG
EIAFDGIFGI APTYRVFTDY AERVEVLKGP TAFLYGISPN SAVGGTINIV PKRAGDTDLT
RLTTDYASNA QGGGAVDVSR RFGEHKEFGI RFNGSARGGD LPIDNLERGA FVGSLALDYR
GERLRATLDI IGQRENLTAP QRPFYPSSGN FAIPSAPNGS RNVQAPWEWS KSEDKSVLGK
VEYDLTDNVT WFGAVGGGNS RVHRLFGLPT MLNSAGDVSI RPENAIFDVD RLSAETGVRS
RFETGAIAHT MTLQSSYLNQ TLDRGLVSGT TQFSNMYNPA YRPEQYVADP TRVAKASEST
LSGVALSDTL SVLNERLQLT VGGRFQQIDS KNYNISTGAL TSSSDETAVT PLVGLVVRPW
SMVSFYANYA EGLSIGETAP TNAINAGETL APYKTTQYEV GTKFDLGRFG LTLSAFQIEK
PFGQLETIGS NLVFSEGGEQ RNRGLELNVF GEVTPGVRLL GGASLIDGEL TKTTSAATLG
NRPVGVPTVQ ANLGGEWDTP FVSGLTLTAN VIYTGEQYVN TANTQMIPSW TRMDLGARYK
TLIDKRPVTF RASVQNVFDK DYWSGVASYS TIAQGLPLTV RLSMTTDF
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