Gene RPB_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1094 
Symbol 
ID3910180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1254595 
End bp1255029 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID637882987 
Producthypothetical protein 
Protein accessionYP_484715 
Protein GI86748219 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.090836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.542302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAC GCCAGATCAG CGACTTCAAG CGCACCACCG CGAACAAACT GCGGACGAAC 
AGCACCGCTG CCGAAGACAT CCTGTGGCGG CAACTACGAC GAATGAATGT GGAAGGAAGT
CACTTCAGAC GGCAGGTTGT GATCGGGCCC TATATCGCCG ATTTCGCCTG CCTCGCGAAG
CGATTGATCA TCGAGGTCGA CGGTTCACAA CACGGCGACG AAGACGGCCT GAGGCGTGAC
GAAACGCGAA CGCAATGGCT GCAGTCGGAA GGCTACCGGG TGATCCGATT TTGGAACAAT
GATGTGATGA GCAAGACCGA CGCCGTGATG GACGCAATCT ATAACGCGAT CGCTGTCACC
CCACCCCGCT CGCCGTTGGC GAGCGACCCT CCCCCTCAAG GGGAGGGTGG GGCCGTGCGT
GGGGAGAAGG AATAA
 
Protein sequence
MVKRQISDFK RTTANKLRTN STAAEDILWR QLRRMNVEGS HFRRQVVIGP YIADFACLAK 
RLIIEVDGSQ HGDEDGLRRD ETRTQWLQSE GYRVIRFWNN DVMSKTDAVM DAIYNAIAVT
PPRSPLASDP PPQGEGGAVR GEKE