| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1091 |
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| Symbol | |
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| ID | 3910177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1251941 |
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| End bp | 1252849 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882984 |
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| Product | peptidase S49 |
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| Protein accession | YP_484712 |
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| Protein GI | 86748216 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.62395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGATC CGGCGACGAG TGGTCGCAGC TCCGCGAGCC TGCTCGACAC TTTCGGCAAA
TGGATTCCGG CCCGGTTCCG CTCCGATATT CCGGTCGTGC CGGTGGTGCG CCTGTCGGGC
GTGATCGGCG CCGTCACGCC GCTGCGGCCG GGCATGTCGC TGGCGGGCGT CGCCAAGCTG
CTGGAGCGTG CGTTCGCGAC GCGCAACGCC AAGGCGGTGG CGCTGGCGAT CAACTCGCCG
GGCGGCTCGC CGGTGCAGTC GCGGCTGATC TATCTGCGCA TCCGCGCGCT GGCGGCCGAA
AAGAAACTGC CGGTCTATGC TTTCGTCGAG GATGTCGCGG CCTCGGGCGG CTACATGATC
GCCTGCGGCG CCGACGAGAT CTATTGCGAC CCCTCCTCGA TCGTCGGATC GATCGGCGTG
GTCGGCGGCA GTTTCGGCTT TCAGGAACTG ATCAAGAAGA TCGGCGTCGA GCGCCGGCTG
TACACCGCCG GCGAGCACAA GGCGCAGCTC GATCCGTTTC TGCCGGAAGA TCCCGGCGAC
GTCGCCCGCG TCAAGGCGCT GCAGCAGGAG ATCCACGCGC TGTTCATTTC GCTGGTGAAA
GACAGCCGCG GTGCGCGGCT GAAGGGCGAC GACGCCAAGC TGTTCTCCGG CGAGTACTGG
GCCGGCGCGA CCTCGGTGTC GCTGGGTCTG TCCGATGCGA TCGGCGACCT CCGCGCGGTG
CTGCGCGACA AATTCGGCGA CAAGGTGCGC ACGCCGGTGA TCGCGGCGCC GACCGGCTTG
CTGTCGGGCC TGATGCGCAA ATCGTCGGGC GCCGGCACAG AGGCCTCGCT CGACGGCTTC
GCGGCGCTGC CCGATCAGCT GATCTCGGCG CTGGAGGCGC GCGCGATCTG GGCGAAATAC
GGCTTTTAG
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| Protein sequence | MNDPATSGRS SASLLDTFGK WIPARFRSDI PVVPVVRLSG VIGAVTPLRP GMSLAGVAKL
LERAFATRNA KAVALAINSP GGSPVQSRLI YLRIRALAAE KKLPVYAFVE DVAASGGYMI
ACGADEIYCD PSSIVGSIGV VGGSFGFQEL IKKIGVERRL YTAGEHKAQL DPFLPEDPGD
VARVKALQQE IHALFISLVK DSRGARLKGD DAKLFSGEYW AGATSVSLGL SDAIGDLRAV
LRDKFGDKVR TPVIAAPTGL LSGLMRKSSG AGTEASLDGF AALPDQLISA LEARAIWAKY
GF
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