Gene RPB_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1064 
Symbol 
ID3908916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1220021 
End bp1220401 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content68% 
IMG OID637882957 
Producthypothetical protein 
Protein accessionYP_484685 
Protein GI86748189 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.581294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA CGCTCACGCT TTTCACCGCC GCCGTTTTCG CGCTCGCCGC TTCCGCGGCC 
TCGGCCATGA CGCTCAAGAC CGCCGACACC GCCGCCGGCA AGACCTTCGT CGACGCCAAG
GGCATGACGC TCTACACCTT CGACAAGGAC GCCGGCGGCA AGTCGATGTG CAACGGCCCC
TGCGCCACCA ACTGGCCGCC GCTCGCCGCC GCAGCCGACG CCAAGCCGAC CGCCGACATG
ACCATCGTGA CGCGCGACGA CGGCAGCAAG ATGTGGGCCT ACAAGGGCAA GCCGCTGTAT
ACCTTCGCCA AGGACATGAA GCCCGGCGAC ACCACCGGCG ACGGCTTCCT CAACGGCGCC
TGGCACATCG CCAAGCCGTA A
 
Protein sequence
MSRTLTLFTA AVFALAASAA SAMTLKTADT AAGKTFVDAK GMTLYTFDKD AGGKSMCNGP 
CATNWPPLAA AADAKPTADM TIVTRDDGSK MWAYKGKPLY TFAKDMKPGD TTGDGFLNGA
WHIAKP