| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0980 |
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| Symbol | |
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| ID | 3909335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1125207 |
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| End bp | 1126208 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882873 |
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| Product | nitrogen-fixing NifU-like protein |
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| Protein accession | YP_484601 |
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| Protein GI | 86748105 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.191022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCA ATCTCGACAG GCTCGATGAA CTCGTCTCCA GTCCGCGCAA TGCCGGCGTG
CTGCTGCAGG CCAACGCGAT CGGCGCCTTC GGCGGCATCC GCTGGGGCGA TGCGGTCAAG
CTGATGCTGC GGGTCGATCC GGCGACCGAC CGGATCGAGC AGGCGCGGTT TCAGGCGTTC
GGCTGCAGCT CGTCGATCGC CGCGGCGTCC GCGGTCACCG AACTGATCAC CGGCAAGACG
CTGGACGACG CCGCGGCGCT CGGCGCGGCC GACATCGCCG ACGATCTCGG CGGCTTGCCG
GCGGCGCGGA TGTATTGCGC GGTGATGGCC TACGAGGCGC TACAGACGGC GATCACGTCC
TATCGGGGCA TTGCGGCGCT GCGCGAGGCC GACGCGGCGC CGTCGTGCAA GTGCCTCGGC
GTCAGCCAGA TGATGATCGA GCGCACCATC CGCTTCAATC GCCTGACCAG CCTGGAACAG
GTGACCCACT ACACCAAGGC GGCCGGGAGC TGCAGCTCCT GCTTCAAGCA GGTCGAAGGC
CTGCTGGCGC GGGTTAATGC CGAGATGGTC GAGGACGGGC TGATCGACGC TGGCGCGGCG
TATCAGCTCG GCTCGACGCA GCAGCGGGCC GTCGACCTGA AGCCGCACGG CGCGCCGCAG
CCGGCGGCCA ACATCTTCTC CGGCAAAGCG GCGCCGGCGC ATCTGCGCGC GATGCCGAAG
AGCCCGCCGC CGCGTCCGGC GACGGCGCAG GCGCCGGTCG CCGGGACCAT CGACGCGCTG
CCGCTGACTT CTCTGGTGGC CGAAGCGCTG GAGGATTTGC GGCCGCATCT GCAGCGCGAC
GGCGGCGATT GCGAACTCGT CAGCGTCGAG GGCAATGTCG TCTATGTCCG GCTGTCGGGC
AATTGCGTCG GCTGCCAATT GTCATCGGTG ACGCTGTCCG GCGTCCAGGC CAGACTCGCC
GACAAGCTCG GCCGGCCGCT GCGCGTGGTG CCGGTGTCAT GA
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| Protein sequence | MLGNLDRLDE LVSSPRNAGV LLQANAIGAF GGIRWGDAVK LMLRVDPATD RIEQARFQAF
GCSSSIAAAS AVTELITGKT LDDAAALGAA DIADDLGGLP AARMYCAVMA YEALQTAITS
YRGIAALREA DAAPSCKCLG VSQMMIERTI RFNRLTSLEQ VTHYTKAAGS CSSCFKQVEG
LLARVNAEMV EDGLIDAGAA YQLGSTQQRA VDLKPHGAPQ PAANIFSGKA APAHLRAMPK
SPPPRPATAQ APVAGTIDAL PLTSLVAEAL EDLRPHLQRD GGDCELVSVE GNVVYVRLSG
NCVGCQLSSV TLSGVQARLA DKLGRPLRVV PVS
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