Gene RPB_0978 details

Gene Information

• Locus tag: RPB_0978
• ID: 3909333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris HaA2
• Kingdom: Bacteria
• Replicon accession: NC_007778
• Strand: +
• Start bp: 1123721
• End bp: 1124431
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637882871
• Product: NifQ
• Protein accession: YP_484599
• Protein GI: 86748103

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.789318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.328088
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGGCG GGGCGAAGCA GCAAGGCGGC GAGGCGGCAC CGGCGGCGCT GCCGCTGCGC 
GTCGTCGCGT CCGGCTTCGC GTCCTCGCCA GCGATCGTGT ATCGGGCGCT GACCGGCGGC 
CTGCCGGCCG AGGCGCGGAT CGACGACGAC CGCGCCTTCG ATCGCCACGT GCTGGCGTCG 
ATCCTGTCGG CGGCGATCAC CGAACCCGGC CCGATCAACC AGCGTTGCGG ACTCGGCGCC 
GACGATTTCG TCGCGCTGGT GACGTCGTTC TTCCCGCACA TTTCGGTGCT GTTCTCCGTG 
CTCGCCGCCG GCGAGCCGGA CGCCGACGAG GAAGCCGCGA TGGTGCGCGA CCTGTTGCTC 
GCGCATCGCT CGACCCCGGG CGAGGTCGGA CGCTGGCTCG CCACCATGGT GGCGCGCCGG 
GCGATGGAGC CGGATCACCT CTGGGAAGAT CTCGGCCTGC GCGACCGCTC CGAGCTGACG 
CGGCTCTTGA TGCGGCACTT CGGCCCGCTG GCCCGCGACA ACATCCGCAA CATGCGCTGG 
AAGCGGTTCT TCTATCGCAA GCTCTGCGAA GACGACGGCA TCGTGATGTG CAGCACGCCG 
GTGTGCTCGC AGTGCAACGA CTTCGCCGAA TGCTTCGGCG ACGAAAGCGG CGAAAGCCGC 
ATGGCCGGCC GCCGGCGAGA ACTGGAGCTG CGCGCCGCGG GCGTGGCGTG A 

 

Protein sequence

MIGGAKQQGG EAAPAALPLR VVASGFASSP AIVYRALTGG LPAEARIDDD RAFDRHVLAS 
ILSAAITEPG PINQRCGLGA DDFVALVTSF FPHISVLFSV LAAGEPDADE EAAMVRDLLL 
AHRSTPGEVG RWLATMVARR AMEPDHLWED LGLRDRSELT RLLMRHFGPL ARDNIRNMRW 
KRFFYRKLCE DDGIVMCSTP VCSQCNDFAE CFGDESGESR MAGRRRELEL RAAGVA