Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0937 |
Symbol | |
ID | 3909791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1084050 |
End bp | 1085048 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637882830 |
Product | LysR family transcriptional regulator |
Protein accession | YP_484558 |
Protein GI | 86748062 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0239089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCG CGCGATCGGC GCAGCAGCGC CGGTCGCCCC GCAGGACGGC AGAGCACGTG GCCAAGACAC AACGCAAGAT CCGCTATGAC TGGAACGATG TCGTCTACTT TCTCGAGGTG GCCCGGCAAC GCAGCCTGGT GCGCGCCGCG GCCAAGCTGA AGGTCGACCA CACCACCGTC AGCCGGCGCA TCCGGGAGCT CGAGCGAAGC CTGAATTCGA CGCTGTTCAA GCGCAGCAAA TCCGGCTTCA GCCTGACCGA AATAGGCATG CGGCTACTGC AATATGCCGA GGGCATGGAA AGCCAGGCGA ACGCGATCGT CGAGGCGATC GGCACCGACA CCGCCGATGC CGGCGGTGCG GTCCGGATCG CGGCGATGGA AGGCATCGGC AGCTTCTATC TCACGCCCTG CATCGTCGAC TTCAATAAGA TCTATCCGTC GATCCAGATC GAACTGATCA CCGATACCCG CCTGCTCGAC CTCAGCCGTC GCGAGGCCGA TATCTTCGTC AGTTTCTTCA GGCCTCACGG CAAGCGATTG TCGATCAAGA AGGTCGGCGA GTTCCGAATT TCGTTGTACG CGTCCAATCG GTATTTCGAG GGCCGGAGCG AGCCGCGAAC GCAGAAGGAA CTGGAAGACC ACGCCTTCAT CGACTTCATC GAAGATCACA TCTACAGCAA GGAGAATCGC TGGCTCTCCG ATGTGTTGCG ACCACCGCAT ACGATCTTTC GCAGCACCAG CCTGGTCGCG CAATCCATCG CCGTGTCCGC AGGGCAGGGA ATCGCGATGC TGCCCACCTA TGTGGCCTCA GGTCGCTCCG AGCTGCGTCC GGTCATGCCG GAACTGTTCA CGACCCGCGA TATCTGGCTC TCGGTCCATG AGGACCTGCT CCACATCGCC CGCATCAAAG CCGTCATCAC TTTCCTCGAG GAGCGTATCG AGGCCGACAG GACGTTCCTG AATTCGGTGA AGAACCGACC AGGTCGGAGG CGCCCGTGA
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Protein sequence | MTVARSAQQR RSPRRTAEHV AKTQRKIRYD WNDVVYFLEV ARQRSLVRAA AKLKVDHTTV SRRIRELERS LNSTLFKRSK SGFSLTEIGM RLLQYAEGME SQANAIVEAI GTDTADAGGA VRIAAMEGIG SFYLTPCIVD FNKIYPSIQI ELITDTRLLD LSRREADIFV SFFRPHGKRL SIKKVGEFRI SLYASNRYFE GRSEPRTQKE LEDHAFIDFI EDHIYSKENR WLSDVLRPPH TIFRSTSLVA QSIAVSAGQG IAMLPTYVAS GRSELRPVMP ELFTTRDIWL SVHEDLLHIA RIKAVITFLE ERIEADRTFL NSVKNRPGRR RP
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