| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0916 |
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| Symbol | |
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| ID | 3909769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1057231 |
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| End bp | 1058037 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882809 |
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| Product | trehalose-6-phosphatase |
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| Protein accession | YP_484538 |
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| Protein GI | 86748042 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.184398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.382992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGA ATCTCGCCGA CGACGCCTCG CGGCCGACTA CCAATTCCGT ACCGGTGCCG
AGCGCGCTGG TGCCGCATCT CGATCAGTGC GCGCTGCTGC TCGATATCGA CGGCACGCTG
CTCGACCTCG CGCCGACGCC GCGCGAAGTC TGGGTGCCGC CGGAACTCGA ACAGACGCTG
CGCGCGCTGC ACGAGCGCAC CTCCGGCGCG CTGGCGCTGG TCAGCGGCCG TTCGATCAAC
GATATCGATC TGATCTTCGC GCCGCTGAAA CTGCCCGCCG TCGGCGGCCA CGGCGCCGAG
ATGCGGCTGT TGTCCAGCGC CGAACAGGTC GCGACCCGCG CGCCGCCGCT GGACCCCGAC
TTGAAAAATC GTCTCGCCGC GATCGCGCGG ATCAGTCCCG GCATTCTGCT CGAAGACAAA
GGCTACTCGC TGGCGCTGCA CTACCGTCTG GCGCCGCACA CCGAGAAAGC GATCTACGAA
TCCGTCGCCG CGATCCGCGC CGAGAATCCG CACGCGCCGC TCGAAGTGCT GCCGGGCAAG
TCGGTGTGCG AGATCAAGCA TGCCGGCGTC ACCAAGGCGA CCGGCGTGCT CGAACTGATG
AATCACGAAC CGTTCAAAGG TCGGCGCCCG GTGTTCCTGG GCGACGACGT CACCGACGAG
ACGGTGTTCG CGATCATGCC GGAACTACGC GGTCTGGCAT TTTCGGTGGG CCGCCACAGC
GACATCGTCG CGGGACATTT CGACGAGCCG CGCGATGTGC GGGCCTGGCT GGCGCGGTTG
CTCGATCCAC AGTTAGCCCC AGGTTAG
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| Protein sequence | MTSNLADDAS RPTTNSVPVP SALVPHLDQC ALLLDIDGTL LDLAPTPREV WVPPELEQTL
RALHERTSGA LALVSGRSIN DIDLIFAPLK LPAVGGHGAE MRLLSSAEQV ATRAPPLDPD
LKNRLAAIAR ISPGILLEDK GYSLALHYRL APHTEKAIYE SVAAIRAENP HAPLEVLPGK
SVCEIKHAGV TKATGVLELM NHEPFKGRRP VFLGDDVTDE TVFAIMPELR GLAFSVGRHS
DIVAGHFDEP RDVRAWLARL LDPQLAPG
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