Gene RPB_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0893 
Symbol 
ID3909073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1026040 
End bp1026720 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID637882786 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_484515 
Protein GI86748019 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC AGGCCGAATT CGCGGTCATT CTGAAGCTGA ATCCCTTGTT CGCCGATCTC 
GGTCCCGAGG AACTGCAGCG GATCGCCGGG CTGTGTCATA CGCAGCAGCT CAATGCCGGC
GAAATGTTGT TCCAGAAGGG TGACGACGGC GACGCGTTGT TCGGCGTGCG GCGCGGCCAG
ATCCGGATCG AGACCGGCGC CTCCGACGGC AGCCGGCTGA CGCTGAATTT CCTCGGCCCC
GGCGATTTGT TCGGCGAGGT CGCGGTGCTG GATGGCCAGA GCCGCACCGC CGACGCCACG
GCCGGCGAAC CCACTGAACT GTTCGTGCTG CGGCGTGACG ATTTCCTCGG TCATCTCGAG
CGCGAACCGA AGCTCGCGGT GAAACTGATC GCACTGCTGT GCCAGCGCAT CCGCTGGATG
AGCGAGCGCA TGGAGGAATC GGTGCTGCAG CCGCTGCCGG TGCGGCTGGC CCGAAGACTG
TGCGCGCTCG CGGCCGATTT CGGCGCCGAG GTGCACATCT CGCAGGAGCA GCTCGGCGTG
TTCGTCGGCG CGGCGCGCGA GAGCGTCAAC CGCCAGCTGC AGAGCTGGCG CAAGGACGGC
ATCCTCGATC TGCACCGCGG CCGCATCCTG CTGAAGAACA TGGGCCGCCT GACGCAAGTC
GCGCGCAGCC AGGAGCGCTG A
 
Protein sequence
MSTQAEFAVI LKLNPLFADL GPEELQRIAG LCHTQQLNAG EMLFQKGDDG DALFGVRRGQ 
IRIETGASDG SRLTLNFLGP GDLFGEVAVL DGQSRTADAT AGEPTELFVL RRDDFLGHLE
REPKLAVKLI ALLCQRIRWM SERMEESVLQ PLPVRLARRL CALAADFGAE VHISQEQLGV
FVGAARESVN RQLQSWRKDG ILDLHRGRIL LKNMGRLTQV ARSQER